Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.8□□□□□ -1.64
HACD3Q9P035 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.8□□□□□ -1.64
HACD3Q9P035 ADAD1P2-201ENST00000588476 646 ntBASIC4.8□□□□□ -1.64
HACD3Q9P035 AC096553.1-201ENST00000605169 829 ntBASIC4.8□□□□□ -1.64
HACD3Q9P035 AL356274.1-201ENST00000617064 410 ntBASIC4.8□□□□□ -1.64
HACD3Q9P035 AC004232.3-201ENST00000622977 525 ntBASIC4.8□□□□□ -1.64
HACD3Q9P035 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.8□□□□□ -1.64
HACD3Q9P035 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.8□□□□□ -1.64
HACD3Q9P035 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.8□□□□□ -1.64
HACD3Q9P035 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HACD3Q9P035 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HACD3Q9P035 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HACD3Q9P035 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HACD3Q9P035 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HACD3Q9P035 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.79□□□□□ -1.64
HACD3Q9P035 VPS35P1-201ENST00000563400 1518 ntBASIC4.79□□□□□ -1.64
HACD3Q9P035 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.79□□□□□ -1.64
HACD3Q9P035 RNA5SP105-201ENST00000391123 113 ntBASIC4.79□□□□□ -1.64
HACD3Q9P035 RNA5SP146-201ENST00000410743 123 ntBASIC4.79□□□□□ -1.64
HACD3Q9P035 AC004448.2-201ENST00000422360 586 ntBASIC4.79□□□□□ -1.64
HACD3Q9P035 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.79□□□□□ -1.64
HACD3Q9P035 NRBF2P3-201ENST00000432731 865 ntBASIC4.79□□□□□ -1.64
HACD3Q9P035 AC007563.3-201ENST00000433233 371 ntBASIC4.79□□□□□ -1.64
HACD3Q9P035 RPL7P61-201ENST00000451721 751 ntBASIC4.79□□□□□ -1.64
HACD3Q9P035 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.79□□□□□ -1.64
HACD3Q9P035 EIF2S2P5-201ENST00000457635 968 ntBASIC4.79□□□□□ -1.64
HACD3Q9P035 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.79□□□□□ -1.64
HACD3Q9P035 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.79□□□□□ -1.64
HACD3Q9P035 AC025164.1-201ENST00000496249 478 ntBASIC4.79□□□□□ -1.64
HACD3Q9P035 SCARNA22-201ENST00000503991 125 ntBASIC4.79□□□□□ -1.64
HACD3Q9P035 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.79□□□□□ -1.64
HACD3Q9P035 STMN1P2-201ENST00000508435 439 ntBASIC4.79□□□□□ -1.64
HACD3Q9P035 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.79□□□□□ -1.64
HACD3Q9P035 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.79□□□□□ -1.64
HACD3Q9P035 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.79□□□□□ -1.64
HACD3Q9P035 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.79□□□□□ -1.64
HACD3Q9P035 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.79□□□□□ -1.64
HACD3Q9P035 BRD9P1-201ENST00000529855 560 ntBASIC4.79□□□□□ -1.64
HACD3Q9P035 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.79□□□□□ -1.64
HACD3Q9P035 AC079075.1-201ENST00000559543 878 ntBASIC4.79□□□□□ -1.64
HACD3Q9P035 ATP5J2P6-201ENST00000565203 266 ntBASIC4.79□□□□□ -1.64
HACD3Q9P035 MIR3934-201ENST00000579806 107 ntBASIC4.79□□□□□ -1.64
HACD3Q9P035 MIR3667-201ENST00000581025 74 ntBASIC4.79□□□□□ -1.64
HACD3Q9P035 AL512782.1-201ENST00000603093 364 ntBASIC4.79□□□□□ -1.64
HACD3Q9P035 AC234782.5-201ENST00000617723 324 ntBASIC4.79□□□□□ -1.64
HACD3Q9P035 AC019080.5-201ENST00000624891 757 ntBASIC4.79□□□□□ -1.64
HACD3Q9P035 AL672167.1-205ENST00000641112 3080 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HACD3Q9P035 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.78□□□□□ -1.64
HACD3Q9P035 AL445487.1-201ENST00000415694 1580 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.78□□□□□ -1.64
HACD3Q9P035 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
HACD3Q9P035 AL136164.3-201ENST00000624429 3978 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 OR52B1P-201ENST00000316506 909 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 RNU1-83P-201ENST00000363426 164 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 SNORD65-201ENST00000391079 73 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.78□□□□□ -1.64
HACD3Q9P035 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HACD3Q9P035 AC073464.3-201ENST00000422564 712 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 AL645608.4-201ENST00000423619 154 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 FABP7P1-201ENST00000424004 391 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HACD3Q9P035 RPL17P35-201ENST00000432217 549 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.78□□□□□ -1.64
HACD3Q9P035 PPIAP13-201ENST00000434706 478 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.78□□□□□ -1.64
HACD3Q9P035 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.78□□□□□ -1.64
HACD3Q9P035 AC104651.2-201ENST00000447549 528 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 VN1R48P-201ENST00000448149 1036 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 AC010733.1-201ENST00000451515 401 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 AC005008.1-201ENST00000456151 612 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 RPS3AP41-201ENST00000462701 778 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 RPL32P9-201ENST00000487963 407 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 DEFB109F-201ENST00000491870 277 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HACD3Q9P035 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HACD3Q9P035 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.78□□□□□ -1.64
HACD3Q9P035 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.78□□□□□ -1.64
HACD3Q9P035 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.78□□□□□ -1.64
HACD3Q9P035 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.78□□□□□ -1.64
HACD3Q9P035 OR5D15P-201ENST00000531671 942 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 AC125612.1-201ENST00000547580 377 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 DYNLL1P4-201ENST00000549314 266 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.78□□□□□ -1.64
HACD3Q9P035 AC087477.6-201ENST00000559595 843 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 AC093249.4-201ENST00000564755 259 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 MIR4737-201ENST00000583979 81 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.78□□□□□ -1.64
HACD3Q9P035 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.78□□□□□ -1.64
HACD3Q9P035 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.78□□□□□ -1.64
HACD3Q9P035 AL391358.1-201ENST00000605342 190 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 AL021707.7-201ENST00000607991 416 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 AC092574.1-201ENST00000609771 420 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.78□□□□□ -1.64
HACD3Q9P035 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.78□□□□□ -1.64
HACD3Q9P035 AC021106.3-201ENST00000623925 531 ntBASIC4.78□□□□□ -1.64
HACD3Q9P035 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HACD3Q9P035 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HACD3Q9P035 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms