Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 U3.2-201ENST00000362981 210 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 RNA5SP27-201ENST00000363839 119 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 RNU6-1200P-201ENST00000384162 107 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 VDAC2P1-201ENST00000399358 958 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AL079342.2-201ENST00000403367 482 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 PGBD4P8-201ENST00000412993 562 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 RPL21P43-201ENST00000425440 472 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 OR2B8P-201ENST00000432841 938 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 MTCO1P52-201ENST00000433928 531 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AC092641.1-201ENST00000440229 772 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AL157827.1-201ENST00000447622 132 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 RNU6-956P-201ENST00000458868 103 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AL024509.2-201ENST00000493462 493 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 DUTP1-201ENST00000493631 470 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AC104971.1-201ENST00000495117 578 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AC104685.1-201ENST00000502445 371 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AC104090.1-201ENST00000506341 1171 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AC109635.6-201ENST00000525487 1113 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AP002963.1-201ENST00000530590 184 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AP000873.5-201ENST00000533906 236 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AP000619.3-201ENST00000535634 1127 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 MIR5708-201ENST00000579723 85 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AC068020.1-201ENST00000594215 661 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AC130352.1-201ENST00000602979 661 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AC011451.2-201ENST00000604303 598 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AP003973.1-201ENST00000604639 691 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 NANOGP3-201ENST00000605855 286 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AC006270.3-201ENST00000605967 1036 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AC012557.1-201ENST00000607115 611 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AC008443.7-201ENST00000622195 246 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AC124312.6-202ENST00000623624 418 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AC244258.1-201ENST00000637553 1071 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 LINC01808-202ENST00000641680 1116 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AC000367.1-201ENST00000452711 1766 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 NCOA4P2-201ENST00000340589 1813 ntBASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 PROS2P-201ENST00000474651 1951 ntBASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 RNU4-7P-201ENST00000364758 141 ntBASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 RNU5E-4P-201ENST00000364931 120 ntBASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 ZNF603P-201ENST00000405613 487 ntBASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 AC105402.1-201ENST00000413336 545 ntBASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 CDC27P1-201ENST00000445384 715 ntBASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 HIGD1AP8-201ENST00000453927 274 ntBASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 RPS18P6-201ENST00000476880 458 ntBASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 AC112198.1-201ENST00000505369 1220 ntBASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 AC079140.3-201ENST00000511111 550 ntBASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 IGLV3-24-201ENST00000517477 197 ntBASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 NPM1P42-201ENST00000560329 862 ntBASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.3□□□□□ -1.4
PDLIM7Q9NR12 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms