Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC092865.4-201ENST00000477936 615 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 RPL21P6-201ENST00000479171 504 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 RPS27AP16-201ENST00000492222 470 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 RPS17P5-201ENST00000498293 408 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS11Q9H270 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS11Q9H270 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS11Q9H270 snoU109.6-201ENST00000516831 118 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.75□□□□□ -1.49
VPS11Q9H270 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS11Q9H270 AP001000.1-201ENST00000526843 742 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS11Q9H270 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS11Q9H270 POLR2KP1-201ENST00000553226 168 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 SULT1C2P2-201ENST00000562517 294 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS11Q9H270 AP005119.1-201ENST00000580956 292 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 MIR3611-201ENST00000584484 83 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 AC015802.2-201ENST00000589690 189 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.75□□□□□ -1.49
VPS11Q9H270 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
VPS11Q9H270 AC112230.1-201ENST00000604342 547 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS11Q9H270 AP003392.5-201ENST00000607857 415 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS11Q9H270 AC007497.1-201ENST00000610421 561 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS11Q9H270 AC244100.4-201ENST00000617747 388 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 STMN1P1-201ENST00000617809 440 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 AC022079.2-201ENST00000619739 566 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS11Q9H270 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.75□□□□□ -1.49
VPS11Q9H270 SEPT14P19-203ENST00000633205 211 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS11Q9H270 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS11Q9H270 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
VPS11Q9H270 AF287957.1-201ENST00000607368 1595 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS11Q9H270 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
VPS11Q9H270 MRRFP1-201ENST00000435941 1675 ntBASIC5.75□□□□□ -1.49
VPS11Q9H270 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS11Q9H270 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS11Q9H270 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS11Q9H270 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS11Q9H270 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS11Q9H270 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS11Q9H270 AC006206.1-201ENST00000544842 3387 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS11Q9H270 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS11Q9H270 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS11Q9H270 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS11Q9H270 RN7SKP184-201ENST00000362348 333 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS11Q9H270 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
VPS11Q9H270 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
VPS11Q9H270 AL034417.1-201ENST00000399343 800 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 RSL24D1P4-201ENST00000400938 484 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS11Q9H270 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS11Q9H270 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS11Q9H270 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS11Q9H270 OR2B8P-201ENST00000432841 938 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 DEFA9P-201ENST00000433042 285 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 VN1R54P-201ENST00000435210 1049 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 GAPDHP59-201ENST00000435908 267 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS11Q9H270 RPS10P18-201ENST00000442662 495 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 SNRPEP8-201ENST00000442866 260 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS11Q9H270 ARL5AP2-201ENST00000444698 533 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 VN1R34P-201ENST00000447387 883 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS11Q9H270 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS11Q9H270 HMGB1P7-201ENST00000450921 612 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS11Q9H270 AC073476.1-201ENST00000452854 407 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 RPS6P2-201ENST00000454208 705 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 CEACAMP11-201ENST00000455211 583 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS11Q9H270 RPL9P33-201ENST00000484311 566 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS11Q9H270 RPS7P6-201ENST00000485777 579 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS11Q9H270 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS11Q9H270 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS11Q9H270 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS11Q9H270 AC116917.1-201ENST00000520558 305 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS11Q9H270 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.74□□□□□ -1.49
VPS11Q9H270 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS11Q9H270 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS11Q9H270 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS11Q9H270 NANOGNBP2-201ENST00000544753 553 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS11Q9H270 ATP5F1P7-201ENST00000567330 760 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 ARGFXP2-201ENST00000579304 949 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.74□□□□□ -1.49
VPS11Q9H270 AL592221.1-201ENST00000605266 382 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS11Q9H270 AC015819.1-201ENST00000613588 663 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms