Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
ABCA3Q99758 ATP1B1P1-201ENST00000509767 915 ntBASIC5.66□□□□□ -1.5
ABCA3Q99758 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.66□□□□□ -1.5
ABCA3Q99758 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
ABCA3Q99758 YPEL5P3-201ENST00000547227 352 ntBASIC5.66□□□□□ -1.5
ABCA3Q99758 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.66□□□□□ -1.5
ABCA3Q99758 AC127024.5-201ENST00000580085 462 ntBASIC5.66□□□□□ -1.5
ABCA3Q99758 VN1R92P-201ENST00000598511 928 ntBASIC5.66□□□□□ -1.5
ABCA3Q99758 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.66□□□□□ -1.5
ABCA3Q99758 FRG1EP-201ENST00000634469 770 ntBASIC5.66□□□□□ -1.5
ABCA3Q99758 AP001153.1-201ENST00000641024 338 ntBASIC5.66□□□□□ -1.5
ABCA3Q99758 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ABCA3Q99758 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.66□□□□□ -1.5
ABCA3Q99758 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ABCA3Q99758 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
ABCA3Q99758 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ABCA3Q99758 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
ABCA3Q99758 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
ABCA3Q99758 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
ABCA3Q99758 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
ABCA3Q99758 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
ABCA3Q99758 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.65□□□□□ -1.5
ABCA3Q99758 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.65□□□□□ -1.5
ABCA3Q99758 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.65□□□□□ -1.5
ABCA3Q99758 AC090312.1-201ENST00000580637 348 ntBASIC5.65□□□□□ -1.5
ABCA3Q99758 MIR3200-201ENST00000580767 85 ntBASIC5.65□□□□□ -1.5
ABCA3Q99758 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.65□□□□□ -1.5
ABCA3Q99758 AC058791.1-201ENST00000608412 3198 ntBASIC5.65□□□□□ -1.5
ABCA3Q99758 RNA5SP439-201ENST00000617595 124 ntBASIC5.65□□□□□ -1.5
ABCA3Q99758 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.65□□□□□ -1.5
ABCA3Q99758 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
ABCA3Q99758 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
ABCA3Q99758 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.65□□□□□ -1.5
ABCA3Q99758 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
ABCA3Q99758 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
ABCA3Q99758 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ABCA3Q99758 AC016588.2-201ENST00000632484 3021 ntBASIC5.65□□□□□ -1.51
ABCA3Q99758 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.65□□□□□ -1.51
ABCA3Q99758 RPS11P1-201ENST00000451072 473 ntBASIC5.65□□□□□ -1.51
ABCA3Q99758 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.65□□□□□ -1.51
ABCA3Q99758 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.65□□□□□ -1.51
ABCA3Q99758 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.65□□□□□ -1.51
ABCA3Q99758 AC022655.2-201ENST00000577280 318 ntBASIC5.65□□□□□ -1.51
ABCA3Q99758 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.65□□□□□ -1.51
ABCA3Q99758 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.65□□□□□ -1.51
ABCA3Q99758 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.65□□□□□ -1.51
ABCA3Q99758 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
ABCA3Q99758 TTC41P-205ENST00000551270 3963 ntBASIC5.64□□□□□ -1.51
ABCA3Q99758 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
ABCA3Q99758 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ABCA3Q99758 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ABCA3Q99758 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ABCA3Q99758 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
ABCA3Q99758 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.64□□□□□ -1.51
ABCA3Q99758 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
ABCA3Q99758 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
ABCA3Q99758 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.64□□□□□ -1.51
ABCA3Q99758 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.64□□□□□ -1.51
ABCA3Q99758 AC004938.1-201ENST00000438468 308 ntBASIC5.64□□□□□ -1.51
ABCA3Q99758 ACTR3P3-201ENST00000480448 893 ntBASIC5.64□□□□□ -1.51
ABCA3Q99758 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ABCA3Q99758 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.64□□□□□ -1.51
ABCA3Q99758 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.64□□□□□ -1.51
ABCA3Q99758 AL049840.6-202ENST00000603373 279 ntBASIC5.64□□□□□ -1.51
ABCA3Q99758 AL592436.1-201ENST00000605135 558 ntBASIC5.64□□□□□ -1.51
ABCA3Q99758 AC018816.2-201ENST00000621460 353 ntBASIC5.64□□□□□ -1.51
ABCA3Q99758 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
ABCA3Q99758 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.64□□□□□ -1.51
ABCA3Q99758 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ABCA3Q99758 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
ABCA3Q99758 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ABCA3Q99758 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
ABCA3Q99758 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
ABCA3Q99758 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.63□□□□□ -1.51
ABCA3Q99758 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
ABCA3Q99758 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ABCA3Q99758 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ABCA3Q99758 RNA5SP175-201ENST00000364275 119 ntBASIC5.63□□□□□ -1.51
ABCA3Q99758 RNU6-213P-201ENST00000384051 104 ntBASIC5.63□□□□□ -1.51
ABCA3Q99758 TCEA1P4-201ENST00000415066 844 ntBASIC5.63□□□□□ -1.51
ABCA3Q99758 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.63□□□□□ -1.51
ABCA3Q99758 RPL23AP81-201ENST00000455252 467 ntBASIC5.63□□□□□ -1.51
ABCA3Q99758 RPL38P1-201ENST00000460914 211 ntBASIC5.63□□□□□ -1.51
ABCA3Q99758 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.63□□□□□ -1.51
ABCA3Q99758 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.63□□□□□ -1.51
ABCA3Q99758 DUXAP2-201ENST00000519198 589 ntBASIC5.63□□□□□ -1.51
ABCA3Q99758 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.63□□□□□ -1.51
ABCA3Q99758 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.63□□□□□ -1.51
ABCA3Q99758 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.63□□□□□ -1.51
ABCA3Q99758 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.63□□□□□ -1.51
ABCA3Q99758 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.63□□□□□ -1.51
ABCA3Q99758 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.63□□□□□ -1.51
ABCA3Q99758 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.63□□□□□ -1.51
ABCA3Q99758 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
ABCA3Q99758 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
ABCA3Q99758 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.63□□□□□ -1.51
ABCA3Q99758 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.63□□□□□ -1.51
ABCA3Q99758 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ABCA3Q99758 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ABCA3Q99758 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms