Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AL449283.1-201ENST00000602631 3403 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 Z74021.1-201ENST00000423610 407 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 EIF4HP2-201ENST00000424380 563 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 RN7SL601P-201ENST00000471221 293 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 BDH2P1-201ENST00000602288 736 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AC113403.1-201ENST00000604910 193 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 LCOR-201ENST00000286067 4542 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AC108032.1-201ENST00000416706 207 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 ARAFP1-201ENST00000422172 605 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 CKS1BP6-201ENST00000424932 240 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AL512326.1-201ENST00000443050 721 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AL935212.3-201ENST00000450729 284 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 RPS26P28-201ENST00000470806 348 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AC025518.1-201ENST00000479856 347 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AC006058.1-201ENST00000568686 5067 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AL445487.1-201ENST00000415694 1580 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 SNORA57.3-201ENST00000411095 141 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AL356968.2-201ENST00000412769 1257 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AL590806.1-201ENST00000415818 853 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 RPL35AP21-201ENST00000437667 333 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 RPL23AP53-201ENST00000521854 457 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AC016957.2-201ENST00000616998 848 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 AL359757.2-201ENST00000624309 274 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 EOGT-210ENST00000615922 1931 ntBASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 UBBP2-201ENST00000376781 231 ntBASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 AC090686.1-201ENST00000481577 749 ntBASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 MIR3945-201ENST00000581853 98 ntBASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 AC025175.1-201ENST00000606482 759 ntBASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 AC008013.2-202ENST00000637965 364 ntBASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 LINC01808-202ENST00000641680 1116 ntBASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 AL133243.3-201ENST00000617415 3004 ntBASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 PRO1804-201ENST00000623780 2050 ntBASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 RNU1-20P-201ENST00000363314 162 ntBASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 RNU6-301P-201ENST00000384277 107 ntBASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 AC120057.2-201ENST00000571520 271 ntBASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 AP000432.2-201ENST00000624164 2048 ntBASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 PDSS1P2-201ENST00000449397 678 ntBASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 AL136126.1-201ENST00000473603 402 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms