Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL21A1Q96P44 ZNF137P-201ENST00000456718 1920 ntBASIC4.29□□□□□ -1.72
COL21A1Q96P44 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 AL391684.1-202ENST00000641293 1636 ntBASIC4.29□□□□□ -1.72
COL21A1Q96P44 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL21A1Q96P44 AC108467.2-201ENST00000617640 1597 ntBASIC4.29□□□□□ -1.72
COL21A1Q96P44 OR52B1P-201ENST00000316506 909 ntBASIC4.29□□□□□ -1.72
COL21A1Q96P44 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL21A1Q96P44 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 DYNLL1P7-201ENST00000429273 258 ntBASIC4.29□□□□□ -1.72
COL21A1Q96P44 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL21A1Q96P44 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 AL591363.1-201ENST00000450091 483 ntBASIC4.29□□□□□ -1.72
COL21A1Q96P44 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 AC010326.1-201ENST00000462726 602 ntBASIC4.29□□□□□ -1.72
COL21A1Q96P44 IGLV2-34-201ENST00000490007 283 ntBASIC4.29□□□□□ -1.72
COL21A1Q96P44 RPL36AP41-201ENST00000493820 306 ntBASIC4.29□□□□□ -1.72
COL21A1Q96P44 AK4P6-201ENST00000505168 528 ntBASIC4.29□□□□□ -1.72
COL21A1Q96P44 RNA5SP446-201ENST00000515955 82 ntBASIC4.29□□□□□ -1.72
COL21A1Q96P44 AC090151.1-201ENST00000520784 730 ntBASIC4.29□□□□□ -1.72
COL21A1Q96P44 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL21A1Q96P44 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 AC023509.5-201ENST00000617434 807 ntBASIC4.29□□□□□ -1.72
COL21A1Q96P44 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 U3.53-201ENST00000628922 216 ntBASIC4.29□□□□□ -1.72
COL21A1Q96P44 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL21A1Q96P44 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL21A1Q96P44 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.29□□□□□ -1.72
COL21A1Q96P44 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL21A1Q96P44 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
COL21A1Q96P44 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.28□□□□□ -1.72
COL21A1Q96P44 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.28□□□□□ -1.72
COL21A1Q96P44 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL21A1Q96P44 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL21A1Q96P44 AC104297.1-201ENST00000393779 870 ntBASIC4.28□□□□□ -1.72
COL21A1Q96P44 RN7SKP106-201ENST00000410832 272 ntBASIC4.28□□□□□ -1.72
COL21A1Q96P44 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.28□□□□□ -1.72
COL21A1Q96P44 GSTM3P2-201ENST00000412746 530 ntBASIC4.28□□□□□ -1.72
COL21A1Q96P44 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.28□□□□□ -1.72
COL21A1Q96P44 RPA2P2-201ENST00000419698 796 ntBASIC4.28□□□□□ -1.72
COL21A1Q96P44 RPL21P91-201ENST00000429231 479 ntBASIC4.28□□□□□ -1.72
COL21A1Q96P44 AL359265.2-201ENST00000434367 631 ntBASIC4.28□□□□□ -1.72
COL21A1Q96P44 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.28□□□□□ -1.72
COL21A1Q96P44 AC011753.3-201ENST00000443436 406 ntBASIC4.28□□□□□ -1.72
COL21A1Q96P44 RPL36AP15-201ENST00000444514 266 ntBASIC4.28□□□□□ -1.72
COL21A1Q96P44 RAB28P3-201ENST00000448325 597 ntBASIC4.28□□□□□ -1.72
COL21A1Q96P44 AC108463.1-201ENST00000450258 347 ntBASIC4.28□□□□□ -1.72
COL21A1Q96P44 AL935212.3-201ENST00000450729 284 ntBASIC4.28□□□□□ -1.72
COL21A1Q96P44 HSPE1P22-201ENST00000456856 327 ntBASIC4.28□□□□□ -1.72
COL21A1Q96P44 AC104763.1-201ENST00000475274 360 ntBASIC4.28□□□□□ -1.72
COL21A1Q96P44 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.28□□□□□ -1.72
COL21A1Q96P44 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.28□□□□□ -1.72
COL21A1Q96P44 PPBPP1-201ENST00000510807 373 ntBASIC4.28□□□□□ -1.72
COL21A1Q96P44 AF186190.1-201ENST00000517470 480 ntBASIC4.28□□□□□ -1.72
COL21A1Q96P44 OR5M2P-201ENST00000529003 936 ntBASIC4.28□□□□□ -1.72
COL21A1Q96P44 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
COL21A1Q96P44 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
COL21A1Q96P44 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL21A1Q96P44 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.28□□□□□ -1.72
COL21A1Q96P44 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.28□□□□□ -1.72
COL21A1Q96P44 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.28□□□□□ -1.72
COL21A1Q96P44 AC015813.4-201ENST00000610469 179 ntBASIC4.28□□□□□ -1.72
COL21A1Q96P44 MIR6780A-201ENST00000615089 68 ntBASIC4.28□□□□□ -1.72
COL21A1Q96P44 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL21A1Q96P44 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
COL21A1Q96P44 AL133243.3-201ENST00000617415 3004 ntBASIC4.28□□□□□ -1.72
COL21A1Q96P44 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.28□□□□□ -1.72
COL21A1Q96P44 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL21A1Q96P44 AC135352.1-201ENST00000506173 1418 ntBASIC4.28□□□□□ -1.72
COL21A1Q96P44 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL21A1Q96P44 AC087190.4-201ENST00000574616 8334 ntBASIC4.27□□□□□ -1.73
COL21A1Q96P44 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
COL21A1Q96P44 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL21A1Q96P44 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL21A1Q96P44 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL21A1Q96P44 MIR448-201ENST00000362131 111 ntBASIC4.27□□□□□ -1.73
COL21A1Q96P44 RNA5SP105-201ENST00000391123 113 ntBASIC4.27□□□□□ -1.73
COL21A1Q96P44 FABP12P1-201ENST00000401911 322 ntBASIC4.27□□□□□ -1.73
COL21A1Q96P44 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.27□□□□□ -1.73
COL21A1Q96P44 AC010469.1-201ENST00000463864 576 ntBASIC4.27□□□□□ -1.73
COL21A1Q96P44 RPL12P20-201ENST00000475538 479 ntBASIC4.27□□□□□ -1.73
COL21A1Q96P44 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms