Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 VN1R7P-201ENST00000619242 903 ntBASIC6.13□□□□□ -1.43
ERCC4Q92889 AC109454.4-201ENST00000623411 649 ntBASIC6.13□□□□□ -1.43
ERCC4Q92889 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC6.13□□□□□ -1.43
ERCC4Q92889 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
ERCC4Q92889 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ERCC4Q92889 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC6.13□□□□□ -1.43
ERCC4Q92889 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ERCC4Q92889 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
ERCC4Q92889 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC4Q92889 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC4Q92889 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
ERCC4Q92889 AC073136.1-201ENST00000449426 2884 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC6.12□□□□□ -1.43
ERCC4Q92889 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.12□□□□□ -1.43
ERCC4Q92889 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC4Q92889 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC4Q92889 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC4Q92889 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC4Q92889 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC4Q92889 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC4Q92889 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC4Q92889 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC4Q92889 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC4Q92889 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC4Q92889 RNA5SP241-201ENST00000391326 114 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC4Q92889 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
ERCC4Q92889 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC6.12□□□□□ -1.43
ERCC4Q92889 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.12□□□□□ -1.43
ERCC4Q92889 OR4K6P-201ENST00000416478 897 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.12□□□□□ -1.43
ERCC4Q92889 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC4Q92889 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC6.12□□□□□ -1.43
ERCC4Q92889 AL589823.1-201ENST00000429577 183 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 AL389925.1-201ENST00000432257 728 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.12□□□□□ -1.43
ERCC4Q92889 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.12□□□□□ -1.43
ERCC4Q92889 ISCA1P2-201ENST00000438679 421 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.12□□□□□ -1.43
ERCC4Q92889 ARAFP2-201ENST00000440565 559 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC6.12□□□□□ -1.43
ERCC4Q92889 MTND5P2-201ENST00000442927 1142 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC4Q92889 AC090804.1-201ENST00000448870 490 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC4Q92889 RPS27AP8-201ENST00000452665 445 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.12□□□□□ -1.43
ERCC4Q92889 AL035090.1-201ENST00000454835 332 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.12□□□□□ -1.43
ERCC4Q92889 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.12□□□□□ -1.43
ERCC4Q92889 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC4Q92889 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.12□□□□□ -1.43
ERCC4Q92889 AC113347.3-201ENST00000509113 148 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.12□□□□□ -1.43
ERCC4Q92889 RFPL4AP5-201ENST00000514977 504 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 FABP5P12-201ENST00000515543 389 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 RNU6-615P-201ENST00000516065 106 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC4Q92889 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.12□□□□□ -1.43
ERCC4Q92889 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC4Q92889 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.12□□□□□ -1.43
ERCC4Q92889 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
ERCC4Q92889 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.12□□□□□ -1.43
ERCC4Q92889 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC6.12□□□□□ -1.43
ERCC4Q92889 MRPS21P7-201ENST00000566937 238 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC6.12□□□□□ -1.43
ERCC4Q92889 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.12□□□□□ -1.43
ERCC4Q92889 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC6.12□□□□□ -1.43
ERCC4Q92889 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC6.12□□□□□ -1.43
ERCC4Q92889 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.12□□□□□ -1.43
ERCC4Q92889 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC6.12□□□□□ -1.43
ERCC4Q92889 AC119751.7-201ENST00000600494 245 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 MRPS35P3-201ENST00000603189 709 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 AC105129.3-201ENST00000605455 485 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 AC135507.1-201ENST00000607214 561 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC6.12□□□□□ -1.43
ERCC4Q92889 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.12□□□□□ -1.43
ERCC4Q92889 AC079248.2-201ENST00000623779 326 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 AC011815.3-201ENST00000624194 473 ntBASIC6.12□□□□□ -1.43
ERCC4Q92889 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC4Q92889 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC4Q92889 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
ERCC4Q92889 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
ERCC4Q92889 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.11□□□□□ -1.43
ERCC4Q92889 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.11□□□□□ -1.43
ERCC4Q92889 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ERCC4Q92889 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
ERCC4Q92889 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ERCC4Q92889 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
ERCC4Q92889 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
ERCC4Q92889 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.11□□□□□ -1.43
ERCC4Q92889 SGO1P1-201ENST00000603525 1447 ntBASIC6.11□□□□□ -1.43
ERCC4Q92889 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ERCC4Q92889 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
ERCC4Q92889 METTL21EP-201ENST00000298105 713 ntBASIC6.11□□□□□ -1.43
ERCC4Q92889 OR52B3P-201ENST00000314715 928 ntBASIC6.11□□□□□ -1.43
ERCC4Q92889 RNU1-146P-201ENST00000364015 165 ntBASIC6.11□□□□□ -1.43
ERCC4Q92889 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.11□□□□□ -1.43
ERCC4Q92889 RNU2-22P-201ENST00000411266 212 ntBASIC6.11□□□□□ -1.43
ERCC4Q92889 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms