Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC005899.7-201ENST00000618199 588 ntBASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 AC005086.4-201ENST00000623065 213 ntBASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 AL356863.1-201ENST00000623378 1080 ntBASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 AC008079.2-201ENST00000623543 20396 ntBASIC4.54□□□□□ -1.68
SHROOM3Q8TF72 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 RNU1-44P-201ENST00000384453 163 ntBASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 TRAV35-201ENST00000390462 330 ntBASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 PRELID3BP10-201ENST00000431957 584 ntBASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 RPS26P2-201ENST00000440331 348 ntBASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 ABCF2P2-201ENST00000450549 296 ntBASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 RPL23AP24-201ENST00000458203 385 ntBASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 ARL4AP1-201ENST00000503220 705 ntBASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 MIR6891-201ENST00000618788 93 ntBASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 AC008013.2-202ENST00000637965 364 ntBASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 AC009951.1-201ENST00000623674 2614 ntBASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 RAD17P1-201ENST00000418130 2042 ntBASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 MIR129-1-201ENST00000384972 72 ntBASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 AL080315.1-201ENST00000406055 466 ntBASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 AC011933.1-201ENST00000413334 321 ntBASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 HSPE1P16-201ENST00000426640 348 ntBASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 AC116533.1-201ENST00000459748 321 ntBASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 AC010326.1-201ENST00000462726 602 ntBASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 ATP5G1P3-201ENST00000463301 410 ntBASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 RN7SL132P-201ENST00000478131 296 ntBASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 AC106785.1-201ENST00000565935 262 ntBASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.53□□□□□ -1.68
SHROOM3Q8TF72 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
SHROOM3Q8TF72 AC093908.1-201ENST00000623125 8092 ntBASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 OR56B2P-202ENST00000641377 2453 ntBASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 RN7SKP97-201ENST00000410966 333 ntBASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 FHP1-201ENST00000442741 703 ntBASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 AC091564.1-201ENST00000464563 479 ntBASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 MTND4LP31-201ENST00000514859 294 ntBASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 SCARNA13-201ENST00000516672 275 ntBASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 AL160281.1-201ENST00000605307 311 ntBASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 LINC01808-202ENST00000641680 1116 ntBASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 AL158163.1-201ENST00000603915 1649 ntBASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 AP000756.2-201ENST00000624168 2567 ntBASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.52□□□□□ -1.69
SHROOM3Q8TF72 AC068870.3-201ENST00000625077 2536 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 SMG1P4-204ENST00000523028 4131 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 MIR3065-201ENST00000390137 79 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 VDAC1P9-201ENST00000412766 841 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 GAPDHP49-201ENST00000421421 961 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 DSTNP2-201ENST00000504533 515 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 AC099676.1-201ENST00000608886 657 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms