Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RNU6-538P-201ENST00000622329 107 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AC244258.1-201ENST00000637553 1071 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 UGT2B26P-201ENST00000508672 1613 ntBASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM48Q8IWZ4 MT-RNR2-201ENST00000387347 1559 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AC245100.2-201ENST00000454544 1679 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 MSL3P1-202ENST00000440028 1468 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 OR52B3P-201ENST00000314715 928 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 RNU6-660P-201ENST00000364566 109 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 RNU2-66P-201ENST00000410650 161 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 RPS26P38-201ENST00000414476 348 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 RPS27AP7-201ENST00000422792 455 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AL009174.1-201ENST00000426577 416 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AL445928.1-201ENST00000435545 222 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 RPS7P3-201ENST00000443360 580 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AP006222.1-205ENST00000450734 457 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 RPL23AP35-201ENST00000451906 501 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AC011476.1-201ENST00000466725 307 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AC099521.1-201ENST00000482557 334 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 ACTG1P13-201ENST00000486987 1043 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AC008083.2-201ENST00000546707 476 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AC136619.2-201ENST00000563361 631 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AC090651.1-201ENST00000567865 634 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 COX6CP7-201ENST00000597056 208 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AC133552.5-201ENST00000604266 540 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AC068276.1-201ENST00000605793 379 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AC069234.5-201ENST00000611056 416 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AC026368.1-201ENST00000614934 690 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 U1.34-201ENST00000618578 162 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AC091305.2-201ENST00000624049 1576 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 PDZK1P1-202ENST00000425209 1350 ntBASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM48Q8IWZ4 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 THAP12P9-201ENST00000503971 2360 ntBASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM48Q8IWZ4 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms