Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 BTF3P8-201ENST00000414577 526 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 REREP1Y-201ENST00000422655 198 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 BX276092.6-201ENST00000430476 250 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 REREP2Y-201ENST00000439103 200 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 AURKAPS1-201ENST00000451805 1212 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 OR52E3P-201ENST00000452083 936 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 AL109741.2-201ENST00000455561 343 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 BX276092.8-201ENST00000455722 250 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 AC090602.1-201ENST00000469695 252 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 RN7SL174P-201ENST00000475578 289 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VRK3Q8IV63 HIGD1AP18-201ENST00000520730 278 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 AL121766.1-201ENST00000547436 487 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 MIR4999-201ENST00000585029 91 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 VN1R82P-201ENST00000601481 356 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 AF131215.7-201ENST00000602443 707 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 AC079089.3-201ENST00000603094 673 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 AL589674.2-201ENST00000604304 337 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 AC000068.2-201ENST00000608816 460 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 OR2BH1P-201ENST00000608850 864 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 AC131235.4-201ENST00000609288 620 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 AC009509.4-201ENST00000619202 509 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 AC016745.2-201ENST00000608834 3443 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 AC003973.3-201ENST00000624863 2822 ntBASIC5.35□□□□□ -1.55
VRK3Q8IV63 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VRK3Q8IV63 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
VRK3Q8IV63 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VRK3Q8IV63 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VRK3Q8IV63 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VRK3Q8IV63 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VRK3Q8IV63 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.35□□□□□ -1.55
VRK3Q8IV63 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
VRK3Q8IV63 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VRK3Q8IV63 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VRK3Q8IV63 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 MIR133A2-201ENST00000347538 102 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VRK3Q8IV63 RNU6-1251P-201ENST00000364502 107 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 RNY3P14-201ENST00000384309 102 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 SNORD56.6-201ENST00000384569 71 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 PPIAP9-201ENST00000403866 498 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 AC098592.2-201ENST00000413158 265 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 Z93019.1-201ENST00000416450 973 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 NPM1P11-201ENST00000417106 855 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 DPPA2P2-201ENST00000418220 897 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 AC006960.1-201ENST00000419980 153 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 SRSF1P1-201ENST00000424058 520 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 RPS4XP16-201ENST00000427198 791 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 MOB1AP1-201ENST00000430903 535 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 AL512326.1-201ENST00000443050 721 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 AP000936.2-201ENST00000447151 681 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 OR51B8P-201ENST00000449892 769 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 AC016724.1-201ENST00000453215 421 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 RN7SL197P-201ENST00000466981 299 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 AC069528.1-202ENST00000482888 637 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 AC068724.1-201ENST00000487100 792 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 AC092045.1-201ENST00000495716 1231 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 ARL4AP1-201ENST00000503220 705 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.34□□□□□ -1.55
VRK3Q8IV63 AC005178.1-201ENST00000508392 440 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 AC008885.2-201ENST00000509506 930 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 SNORA70.11-201ENST00000515987 138 ntBASIC5.34□□□□□ -1.55
VRK3Q8IV63 SNORA70.13-201ENST00000516116 138 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms