Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 MIR30B-201ENST00000384850 88 ntBASIC2.96□□□□□ -1.94
CSMD3Q7Z407 ATP5F1P4-201ENST00000397288 746 ntBASIC2.96□□□□□ -1.94
CSMD3Q7Z407 AC115285.1-201ENST00000424879 736 ntBASIC2.96□□□□□ -1.94
CSMD3Q7Z407 AC092162.1-201ENST00000432828 434 ntBASIC2.96□□□□□ -1.94
CSMD3Q7Z407 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 MTND6P6-201ENST00000478031 263 ntBASIC2.96□□□□□ -1.94
CSMD3Q7Z407 AC110768.1-201ENST00000509222 400 ntBASIC2.96□□□□□ -1.94
CSMD3Q7Z407 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 AC006065.6-201ENST00000625201 545 ntBASIC2.96□□□□□ -1.94
CSMD3Q7Z407 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 AC016588.2-201ENST00000632484 3021 ntBASIC2.96□□□□□ -1.94
CSMD3Q7Z407 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CSMD3Q7Z407 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 AL031121.1-201ENST00000406553 254 ntBASIC2.95□□□□□ -1.94
CSMD3Q7Z407 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 RPS27AP17-201ENST00000463344 455 ntBASIC2.95□□□□□ -1.94
CSMD3Q7Z407 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 BMPR1APS1-201ENST00000403332 1598 ntBASIC2.95□□□□□ -1.94
CSMD3Q7Z407 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 RN7SKP156-201ENST00000410308 342 ntBASIC2.95□□□□□ -1.94
CSMD3Q7Z407 RPL7P2-201ENST00000427639 268 ntBASIC2.95□□□□□ -1.94
CSMD3Q7Z407 RPS4XP4-201ENST00000443195 763 ntBASIC2.95□□□□□ -1.94
CSMD3Q7Z407 RPS20P4-201ENST00000461659 355 ntBASIC2.95□□□□□ -1.94
CSMD3Q7Z407 RN7SL429P-201ENST00000479090 223 ntBASIC2.95□□□□□ -1.94
CSMD3Q7Z407 RN7SL489P-201ENST00000486185 223 ntBASIC2.95□□□□□ -1.94
CSMD3Q7Z407 RN7SL327P-201ENST00000488659 223 ntBASIC2.95□□□□□ -1.94
CSMD3Q7Z407 AC111000.6-201ENST00000514471 709 ntBASIC2.95□□□□□ -1.94
CSMD3Q7Z407 RNU4ATAC18P-201ENST00000516179 126 ntBASIC2.95□□□□□ -1.94
CSMD3Q7Z407 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 RN7SL853P-201ENST00000617250 223 ntBASIC2.95□□□□□ -1.94
CSMD3Q7Z407 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 AL731532.2-201ENST00000623542 1953 ntBASIC2.95□□□□□ -1.94
CSMD3Q7Z407 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 DDX18P5-201ENST00000534547 1306 ntBASIC2.95□□□□□ -1.94
CSMD3Q7Z407 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 AL390879.2-203ENST00000426943 1121 ntBASIC2.95□□□□□ -1.94
CSMD3Q7Z407 EIF2S2P5-201ENST00000457635 968 ntBASIC2.95□□□□□ -1.94
CSMD3Q7Z407 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 MIR5685-201ENST00000579080 79 ntBASIC2.95□□□□□ -1.94
CSMD3Q7Z407 AC079587.1-201ENST00000603846 277 ntBASIC2.95□□□□□ -1.94
CSMD3Q7Z407 Z98200.1-201ENST00000607298 470 ntBASIC2.95□□□□□ -1.94
CSMD3Q7Z407 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC2.95□□□□□ -1.94
CSMD3Q7Z407 EOGT-210ENST00000615922 1931 ntBASIC2.94□□□□□ -1.94
CSMD3Q7Z407 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 RNU1-63P-201ENST00000383902 164 ntBASIC2.94□□□□□ -1.94
CSMD3Q7Z407 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 AL139247.1-201ENST00000422768 325 ntBASIC2.94□□□□□ -1.94
CSMD3Q7Z407 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 MTND1P6-201ENST00000523621 946 ntBASIC2.94□□□□□ -1.94
CSMD3Q7Z407 AC113403.1-201ENST00000604910 193 ntBASIC2.94□□□□□ -1.94
CSMD3Q7Z407 AL159169.3-201ENST00000608871 561 ntBASIC2.94□□□□□ -1.94
CSMD3Q7Z407 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 TEX41-265ENST00000627785 704 ntTSL 5 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 AL034370.1-201ENST00000397254 1590 ntBASIC2.94□□□□□ -1.94
CSMD3Q7Z407 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms