Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AL450023.1-201ENST00000450868 751 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 ELOCP12-201ENST00000458706 328 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 OR2AO1P-201ENST00000476497 403 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 RPL7P39-201ENST00000481157 744 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 AC027338.1-201ENST00000514840 825 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 RNA5SP362-201ENST00000516048 118 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 SNORA43.3-201ENST00000517240 103 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 AC015720.2-201ENST00000567709 334 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 AC005520.3-201ENST00000602874 370 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 AC008115.3-201ENST00000614874 549 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 AL596275.2-204ENST00000641628 552 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 AL596275.2-206ENST00000641957 626 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 AL136964.1-201ENST00000622038 2990 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 AL356489.2-201ENST00000566968 3528 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 AC008432.1-201ENST00000615912 1320 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 AL159987.1-201ENST00000347911 293 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 RN7SKP44-201ENST00000363602 316 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 RN7SKP124-201ENST00000364730 341 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 MIR105-2-201ENST00000385083 81 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 GTF3AP1-201ENST00000416942 1004 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 OR2AH1P-201ENST00000425717 928 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 RPL12P17-201ENST00000432393 498 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 AC092170.1-201ENST00000440211 356 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 IGHV5-78-201ENST00000450948 295 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 RPS23P6-201ENST00000466136 431 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 RN7SL583P-201ENST00000475692 287 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 RPL32P33-201ENST00000487023 394 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 AC090638.1-201ENST00000498296 909 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 OR5H3P-201ENST00000502817 919 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 AC008638.1-201ENST00000506035 866 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 RN7SKP96-201ENST00000516948 297 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 OR5AZ1P-201ENST00000527448 943 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 DPPA2P4-201ENST00000563717 878 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 MIR1273E-201ENST00000581165 102 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 AC063977.5-201ENST00000601044 974 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 AC026741.1-201ENST00000605892 482 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 OR2BH1P-201ENST00000608850 864 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 AP000864.1-201ENST00000609424 650 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 AC096586.1-201ENST00000610267 561 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 AC079395.2-201ENST00000610982 737 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 MIR6837-201ENST00000620884 64 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 AP003400.6-201ENST00000624698 740 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 AC073869.8-201ENST00000641806 335 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 PNPT1P2-201ENST00000456768 2050 ntBASIC4.56□□□□□ -1.68
C11orf88Q6PI97 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
C11orf88Q6PI97 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms