Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC58Q4VC31 EIF3FP1-201ENST00000613970 806 ntBASIC4.04□□□□□ -1.76
CCDC58Q4VC31 OR8A1-204ENST00000642111 1145 ntBASIC4.04□□□□□ -1.76
CCDC58Q4VC31 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC58Q4VC31 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC58Q4VC31 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC58Q4VC31 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
CCDC58Q4VC31 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC58Q4VC31 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 AL391684.1-202ENST00000641293 1636 ntBASIC4.03□□□□□ -1.76
CCDC58Q4VC31 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 PABPC1P6-201ENST00000445594 1829 ntBASIC4.03□□□□□ -1.76
CCDC58Q4VC31 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 AC073335.1-201ENST00000427776 363 ntBASIC4.03□□□□□ -1.76
CCDC58Q4VC31 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 HMGB3P22-202ENST00000451823 572 ntBASIC4.03□□□□□ -1.76
CCDC58Q4VC31 VN1R32P-201ENST00000452234 905 ntBASIC4.03□□□□□ -1.76
CCDC58Q4VC31 SCARNA22-201ENST00000503991 125 ntBASIC4.03□□□□□ -1.76
CCDC58Q4VC31 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 FTH1P9-201ENST00000513251 355 ntBASIC4.03□□□□□ -1.76
CCDC58Q4VC31 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 TOMM20P2-201ENST00000540082 421 ntBASIC4.03□□□□□ -1.76
CCDC58Q4VC31 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 AC006116.3-201ENST00000592968 361 ntBASIC4.03□□□□□ -1.76
CCDC58Q4VC31 AC010680.3-201ENST00000604215 520 ntBASIC4.03□□□□□ -1.76
CCDC58Q4VC31 AC010201.1-201ENST00000605051 540 ntBASIC4.03□□□□□ -1.76
CCDC58Q4VC31 AC015982.1-201ENST00000608113 465 ntBASIC4.03□□□□□ -1.76
CCDC58Q4VC31 AC053481.2-202ENST00000582394 1500 ntBASIC4.03□□□□□ -1.76
CCDC58Q4VC31 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 AP001486.2-201ENST00000561652 5113 ntBASIC4.03□□□□□ -1.76
CCDC58Q4VC31 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC58Q4VC31 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AC067945.1-201ENST00000342609 618 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 U3.25-201ENST00000391209 220 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 SDHCP2-201ENST00000398565 501 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 MIR1282-201ENST00000408865 101 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 RN7SKP177-201ENST00000410567 355 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 RN7SKP167-201ENST00000411047 285 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AP000534.2-201ENST00000412729 568 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 HMGB3P10-201ENST00000434734 572 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 CNOT7P2-201ENST00000441051 832 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 IGLV2-34-201ENST00000490007 283 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AC109462.1-201ENST00000491087 368 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 RPL37AP8-201ENST00000494116 276 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 RN7SKP66-201ENST00000516681 231 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AC013701.1-201ENST00000522657 465 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AGGF1P8-201ENST00000562979 1000 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 CYP4A43P-201ENST00000568156 121 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 BPIFA4P-203ENST00000603168 689 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AC087763.1-201ENST00000603391 286 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AL034374.2-201ENST00000605281 548 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AC009163.6-201ENST00000612367 342 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AC026124.2-201ENST00000621847 656 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 AL592437.2-201ENST00000421655 2434 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 NXPH1-205ENST00000602349 1953 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC58Q4VC31 MTND4P10-201ENST00000446199 1363 ntBASIC4.02□□□□□ -1.77
CCDC58Q4VC31 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms