Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC96Q2M329 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC96Q2M329 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC96Q2M329 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC96Q2M329 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC96Q2M329 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC96Q2M329 AC010200.2-201ENST00000605098 235 ntBASIC5.69□□□□□ -1.5
CCDC96Q2M329 AC005972.3-201ENST00000606304 481 ntBASIC5.69□□□□□ -1.5
CCDC96Q2M329 AL161616.1-201ENST00000611867 286 ntBASIC5.69□□□□□ -1.5
CCDC96Q2M329 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC96Q2M329 AL022401.1-201ENST00000619498 108 ntBASIC5.69□□□□□ -1.5
CCDC96Q2M329 AL023881.1-201ENST00000621088 301 ntBASIC5.69□□□□□ -1.5
CCDC96Q2M329 HPVC1-201ENST00000629899 1198 ntBASIC5.69□□□□□ -1.5
CCDC96Q2M329 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC96Q2M329 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC96Q2M329 AL356489.2-201ENST00000566968 3528 ntBASIC5.69□□□□□ -1.5
CCDC96Q2M329 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC96Q2M329 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.69□□□□□ -1.5
CCDC96Q2M329 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC96Q2M329 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC96Q2M329 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC96Q2M329 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC96Q2M329 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC96Q2M329 AC022893.2-201ENST00000564832 3296 ntBASIC5.68□□□□□ -1.5
CCDC96Q2M329 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CCDC96Q2M329 AL049555.1-201ENST00000562834 1933 ntBASIC5.68□□□□□ -1.5
CCDC96Q2M329 AC011447.7-201ENST00000624228 1590 ntBASIC5.68□□□□□ -1.5
CCDC96Q2M329 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC96Q2M329 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC96Q2M329 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC96Q2M329 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC96Q2M329 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CCDC96Q2M329 RNU4-31P-201ENST00000384211 141 ntBASIC5.68□□□□□ -1.5
CCDC96Q2M329 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CCDC96Q2M329 QRSL1P2-201ENST00000418582 964 ntBASIC5.68□□□□□ -1.5
CCDC96Q2M329 IPMKP1-201ENST00000425988 855 ntBASIC5.68□□□□□ -1.5
CCDC96Q2M329 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
CCDC96Q2M329 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC96Q2M329 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.68□□□□□ -1.5
CCDC96Q2M329 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC96Q2M329 AC025181.1-201ENST00000477507 416 ntBASIC5.68□□□□□ -1.5
CCDC96Q2M329 COL6A4P2-205ENST00000509855 506 ntBASIC5.68□□□□□ -1.5
CCDC96Q2M329 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC96Q2M329 HMGB1P19-201ENST00000517578 577 ntBASIC5.68□□□□□ -1.5
CCDC96Q2M329 IGKV1-32-201ENST00000519290 311 ntBASIC5.68□□□□□ -1.5
CCDC96Q2M329 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC96Q2M329 AC137768.1-201ENST00000549998 553 ntBASIC5.68□□□□□ -1.5
CCDC96Q2M329 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC96Q2M329 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC96Q2M329 AL049839.1-201ENST00000556151 657 ntBASIC5.68□□□□□ -1.5
CCDC96Q2M329 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC96Q2M329 ADAD1P2-201ENST00000588476 646 ntBASIC5.68□□□□□ -1.5
CCDC96Q2M329 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC96Q2M329 AC104785.1-201ENST00000603220 588 ntBASIC5.68□□□□□ -1.5
CCDC96Q2M329 AC011453.2-201ENST00000603737 729 ntBASIC5.68□□□□□ -1.5
CCDC96Q2M329 AC104687.2-201ENST00000604442 342 ntBASIC5.68□□□□□ -1.5
CCDC96Q2M329 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC96Q2M329 AC007342.8-201ENST00000623278 678 ntBASIC5.68□□□□□ -1.5
CCDC96Q2M329 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC96Q2M329 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CCDC96Q2M329 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC96Q2M329 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CCDC96Q2M329 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC96Q2M329 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
CCDC96Q2M329 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CCDC96Q2M329 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC96Q2M329 A2MP1-204ENST00000566278 4130 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 AC096656.1-201ENST00000623826 1364 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC96Q2M329 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 Z73965.1-201ENST00000623412 2297 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC96Q2M329 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 AC017079.1-201ENST00000333650 415 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC96Q2M329 SNORA40.4-201ENST00000390971 128 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC96Q2M329 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 AC114878.1-201ENST00000441166 358 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 CYCSP24-201ENST00000445119 316 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 MTND6P6-201ENST00000478031 263 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 AC008897.1-201ENST00000494006 347 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 NDUFB4P12-201ENST00000513465 390 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 SMARCE1P4-201ENST00000523647 241 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 AC022882.1-201ENST00000532142 501 ntBASIC5.67□□□□□ -1.5
CCDC96Q2M329 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CCDC96Q2M329 CR383656.6-201ENST00000550518 394 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms