Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.77□□□□□ -1.65
LTBQ06643 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LTBQ06643 HIGD1AP4-201ENST00000430194 280 ntBASIC4.77□□□□□ -1.65
LTBQ06643 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.77□□□□□ -1.65
LTBQ06643 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.77□□□□□ -1.65
LTBQ06643 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.77□□□□□ -1.65
LTBQ06643 KATNBL1P3-201ENST00000443475 909 ntBASIC4.77□□□□□ -1.65
LTBQ06643 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.77□□□□□ -1.65
LTBQ06643 TPTE2P5-203ENST00000458118 728 ntBASIC4.77□□□□□ -1.65
LTBQ06643 AC010468.1-201ENST00000461022 817 ntBASIC4.77□□□□□ -1.65
LTBQ06643 PRDX3P4-201ENST00000470828 747 ntBASIC4.77□□□□□ -1.65
LTBQ06643 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
LTBQ06643 AC068587.1-201ENST00000483613 781 ntBASIC4.77□□□□□ -1.65
LTBQ06643 AC109462.1-201ENST00000491087 368 ntBASIC4.77□□□□□ -1.65
LTBQ06643 RPS24P16-201ENST00000497294 392 ntBASIC4.77□□□□□ -1.65
LTBQ06643 MYL12BP2-201ENST00000503948 512 ntBASIC4.77□□□□□ -1.65
LTBQ06643 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LTBQ06643 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.77□□□□□ -1.65
LTBQ06643 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.77□□□□□ -1.65
LTBQ06643 RNU6-941P-201ENST00000516346 108 ntBASIC4.77□□□□□ -1.65
LTBQ06643 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.77□□□□□ -1.65
LTBQ06643 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.77□□□□□ -1.65
LTBQ06643 MTCO1P47-201ENST00000523889 1271 ntBASIC4.77□□□□□ -1.65
LTBQ06643 OR7E128P-201ENST00000532736 1024 ntBASIC4.77□□□□□ -1.65
LTBQ06643 AC126177.5-201ENST00000549599 178 ntBASIC4.77□□□□□ -1.65
LTBQ06643 AC137768.1-201ENST00000549998 553 ntBASIC4.77□□□□□ -1.65
LTBQ06643 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.77□□□□□ -1.65
LTBQ06643 AC018552.1-201ENST00000562099 811 ntBASIC4.77□□□□□ -1.65
LTBQ06643 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.77□□□□□ -1.65
LTBQ06643 PRPF19P1-201ENST00000584766 898 ntBASIC4.77□□□□□ -1.65
LTBQ06643 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.77□□□□□ -1.65
LTBQ06643 Z82195.1-201ENST00000604558 398 ntBASIC4.77□□□□□ -1.65
LTBQ06643 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.77□□□□□ -1.65
LTBQ06643 AC122108.2-201ENST00000611946 526 ntBASIC4.77□□□□□ -1.65
LTBQ06643 AC090116.1-201ENST00000615679 446 ntBASIC4.77□□□□□ -1.65
LTBQ06643 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.77□□□□□ -1.65
LTBQ06643 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.77□□□□□ -1.65
LTBQ06643 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
LTBQ06643 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.77□□□□□ -1.65
LTBQ06643 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LTBQ06643 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LTBQ06643 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LTBQ06643 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.77□□□□□ -1.65
LTBQ06643 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LTBQ06643 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LTBQ06643 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LTBQ06643 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LTBQ06643 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LTBQ06643 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
LTBQ06643 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.76□□□□□ -1.65
LTBQ06643 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LTBQ06643 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LTBQ06643 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
LTBQ06643 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LTBQ06643 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.76□□□□□ -1.65
LTBQ06643 Y_RNA.318-201ENST00000365131 97 ntBASIC4.76□□□□□ -1.65
LTBQ06643 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LTBQ06643 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.76□□□□□ -1.65
LTBQ06643 MIR589-201ENST00000385238 99 ntBASIC4.76□□□□□ -1.65
LTBQ06643 RNU6-1242P-201ENST00000391052 103 ntBASIC4.76□□□□□ -1.65
LTBQ06643 RPL21P67-201ENST00000402896 478 ntBASIC4.76□□□□□ -1.65
LTBQ06643 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LTBQ06643 RNA5SP487-201ENST00000410186 122 ntBASIC4.76□□□□□ -1.65
LTBQ06643 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.76□□□□□ -1.65
LTBQ06643 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.76□□□□□ -1.65
LTBQ06643 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.76□□□□□ -1.65
LTBQ06643 AC016907.1-201ENST00000419483 435 ntBASIC4.76□□□□□ -1.65
LTBQ06643 AC093162.1-201ENST00000419682 124 ntBASIC4.76□□□□□ -1.65
LTBQ06643 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.76□□□□□ -1.65
LTBQ06643 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
LTBQ06643 OR5M12P-201ENST00000423388 929 ntBASIC4.76□□□□□ -1.65
LTBQ06643 AL160175.1-201ENST00000428124 247 ntBASIC4.76□□□□□ -1.65
LTBQ06643 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.76□□□□□ -1.65
LTBQ06643 AL157884.3-201ENST00000448273 1184 ntBASIC4.76□□□□□ -1.65
LTBQ06643 PRPF38AP1-201ENST00000451976 933 ntBASIC4.76□□□□□ -1.65
LTBQ06643 AL356981.1-201ENST00000454879 684 ntBASIC4.76□□□□□ -1.65
LTBQ06643 RPS29P33-201ENST00000456717 146 ntBASIC4.76□□□□□ -1.65
LTBQ06643 AC245028.2-201ENST00000458673 253 ntBASIC4.76□□□□□ -1.65
LTBQ06643 RN7SL385P-201ENST00000468873 276 ntBASIC4.76□□□□□ -1.65
LTBQ06643 TPT1P3-201ENST00000492841 512 ntBASIC4.76□□□□□ -1.65
LTBQ06643 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.76□□□□□ -1.65
LTBQ06643 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.76□□□□□ -1.65
LTBQ06643 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.76□□□□□ -1.65
LTBQ06643 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LTBQ06643 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.76□□□□□ -1.65
LTBQ06643 HMGB1P40-201ENST00000525121 540 ntBASIC4.76□□□□□ -1.65
LTBQ06643 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
LTBQ06643 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.76□□□□□ -1.65
LTBQ06643 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.76□□□□□ -1.65
LTBQ06643 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LTBQ06643 AGGF1P6-201ENST00000569213 976 ntBASIC4.76□□□□□ -1.65
LTBQ06643 MIR3934-201ENST00000579806 107 ntBASIC4.76□□□□□ -1.65
LTBQ06643 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.76□□□□□ -1.65
LTBQ06643 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.76□□□□□ -1.65
LTBQ06643 PIGPP4-201ENST00000584447 307 ntBASIC4.76□□□□□ -1.65
LTBQ06643 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.76□□□□□ -1.65
LTBQ06643 CCDC58P3-201ENST00000590792 430 ntBASIC4.76□□□□□ -1.65
LTBQ06643 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.76□□□□□ -1.65
LTBQ06643 AC010620.1-201ENST00000601088 1102 ntBASIC4.76□□□□□ -1.65
LTBQ06643 AC009090.3-201ENST00000616553 565 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms