Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LMO4P61968 AC125336.1-201ENST00000508893 2827 ntBASIC4.05□□□□□ -1.76
LMO4P61968 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LMO4P61968 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LMO4P61968 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
LMO4P61968 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LMO4P61968 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
LMO4P61968 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LMO4P61968 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LMO4P61968 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LMO4P61968 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LMO4P61968 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
LMO4P61968 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.05□□□□□ -1.76
LMO4P61968 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
LMO4P61968 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LMO4P61968 RNY3P9-201ENST00000384727 106 ntBASIC4.05□□□□□ -1.76
LMO4P61968 MIR141-201ENST00000384975 95 ntBASIC4.05□□□□□ -1.76
LMO4P61968 TAS2R15P-201ENST00000390674 928 ntBASIC4.05□□□□□ -1.76
LMO4P61968 MIR298-201ENST00000401212 88 ntBASIC4.05□□□□□ -1.76
LMO4P61968 RNA5SP345-201ENST00000410646 108 ntBASIC4.05□□□□□ -1.76
LMO4P61968 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.05□□□□□ -1.76
LMO4P61968 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LMO4P61968 AC119751.6-201ENST00000416712 186 ntBASIC4.05□□□□□ -1.76
LMO4P61968 BX510359.2-201ENST00000417920 305 ntBASIC4.05□□□□□ -1.76
LMO4P61968 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.05□□□□□ -1.76
LMO4P61968 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.05□□□□□ -1.76
LMO4P61968 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.05□□□□□ -1.76
LMO4P61968 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.05□□□□□ -1.76
LMO4P61968 AL513321.1-201ENST00000441175 761 ntBASIC4.05□□□□□ -1.76
LMO4P61968 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.05□□□□□ -1.76
LMO4P61968 XKRY2-201ENST00000442362 1093 ntBASIC4.05□□□□□ -1.76
LMO4P61968 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.05□□□□□ -1.76
LMO4P61968 AL157827.1-201ENST00000447622 132 ntBASIC4.05□□□□□ -1.76
LMO4P61968 AC000111.2-201ENST00000448200 210 ntBASIC4.05□□□□□ -1.76
LMO4P61968 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.05□□□□□ -1.76
LMO4P61968 AC022431.1-201ENST00000450941 438 ntBASIC4.05□□□□□ -1.76
LMO4P61968 OR52E3P-201ENST00000452083 936 ntBASIC4.05□□□□□ -1.76
LMO4P61968 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.05□□□□□ -1.76
LMO4P61968 NDUFA12P1-201ENST00000455914 406 ntBASIC4.05□□□□□ -1.76
LMO4P61968 RPS5P7-201ENST00000456664 608 ntBASIC4.05□□□□□ -1.76
LMO4P61968 AC010326.1-201ENST00000462726 602 ntBASIC4.05□□□□□ -1.76
LMO4P61968 AC020898.1-201ENST00000474167 787 ntBASIC4.05□□□□□ -1.76
LMO4P61968 NPM1P17-201ENST00000479221 602 ntBASIC4.05□□□□□ -1.76
LMO4P61968 HMGB1P3-201ENST00000502802 616 ntBASIC4.05□□□□□ -1.76
LMO4P61968 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.05□□□□□ -1.76
LMO4P61968 AC020699.1-201ENST00000505161 445 ntBASIC4.05□□□□□ -1.76
LMO4P61968 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.05□□□□□ -1.76
LMO4P61968 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.05□□□□□ -1.76
LMO4P61968 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.05□□□□□ -1.76
LMO4P61968 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.05□□□□□ -1.76
LMO4P61968 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LMO4P61968 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.05□□□□□ -1.76
LMO4P61968 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LMO4P61968 PRPF19P1-201ENST00000584766 898 ntBASIC4.05□□□□□ -1.76
LMO4P61968 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.05□□□□□ -1.76
LMO4P61968 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.05□□□□□ -1.76
LMO4P61968 ELOCP28-201ENST00000590044 317 ntBASIC4.05□□□□□ -1.76
LMO4P61968 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.05□□□□□ -1.76
LMO4P61968 AC013444.2-201ENST00000603317 787 ntBASIC4.05□□□□□ -1.76
LMO4P61968 DUXAP3-201ENST00000603616 594 ntBASIC4.05□□□□□ -1.76
LMO4P61968 AC245389.2-201ENST00000616023 576 ntBASIC4.05□□□□□ -1.76
LMO4P61968 AC242843.1-201ENST00000618702 573 ntBASIC4.05□□□□□ -1.76
LMO4P61968 AC145207.9-201ENST00000623802 325 ntBASIC4.05□□□□□ -1.76
LMO4P61968 MIR7641-1-201ENST00000627518 61 ntBASIC4.05□□□□□ -1.76
LMO4P61968 AL590396.4-201ENST00000636779 956 ntBASIC4.05□□□□□ -1.76
LMO4P61968 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
LMO4P61968 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.05□□□□□ -1.76
LMO4P61968 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.05□□□□□ -1.76
LMO4P61968 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.05□□□□□ -1.76
LMO4P61968 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
LMO4P61968 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.05□□□□□ -1.76
LMO4P61968 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LMO4P61968 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.04□□□□□ -1.76
LMO4P61968 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.04□□□□□ -1.76
LMO4P61968 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LMO4P61968 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LMO4P61968 AC140134.1-201ENST00000511830 3544 ntBASIC4.04□□□□□ -1.76
LMO4P61968 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LMO4P61968 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.04□□□□□ -1.76
LMO4P61968 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LMO4P61968 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LMO4P61968 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LMO4P61968 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
LMO4P61968 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
LMO4P61968 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.04□□□□□ -1.76
LMO4P61968 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LMO4P61968 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LMO4P61968 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.04□□□□□ -1.76
LMO4P61968 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LMO4P61968 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
LMO4P61968 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LMO4P61968 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
LMO4P61968 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LMO4P61968 SNORA73.1-201ENST00000363107 205 ntBASIC4.04□□□□□ -1.76
LMO4P61968 RNU1-32P-201ENST00000363937 159 ntBASIC4.04□□□□□ -1.76
LMO4P61968 SNORD115-48-201ENST00000364764 76 ntBASIC4.04□□□□□ -1.76
LMO4P61968 RNU6-31P-201ENST00000384388 108 ntBASIC4.04□□□□□ -1.76
LMO4P61968 U3.30-201ENST00000391308 210 ntBASIC4.04□□□□□ -1.76
LMO4P61968 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LMO4P61968 RSU1P3-201ENST00000412878 835 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms