Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.02□□□□□ -1.45
RHBDL3P58872 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RHBDL3P58872 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RHBDL3P58872 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
RHBDL3P58872 AL049737.1-201ENST00000413920 1403 ntBASIC6.01□□□□□ -1.45
RHBDL3P58872 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.01□□□□□ -1.45
RHBDL3P58872 AC026523.2-201ENST00000625039 7739 ntBASIC6.01□□□□□ -1.45
RHBDL3P58872 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RHBDL3P58872 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
RHBDL3P58872 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
RHBDL3P58872 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
RHBDL3P58872 RNU6-1257P-201ENST00000384625 110 ntBASIC6.01□□□□□ -1.45
RHBDL3P58872 SNORA48.4-201ENST00000391089 134 ntBASIC6.01□□□□□ -1.45
RHBDL3P58872 RNA5SP241-201ENST00000391326 114 ntBASIC6.01□□□□□ -1.45
RHBDL3P58872 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RHBDL3P58872 RPL22P22-201ENST00000395439 379 ntBASIC6.01□□□□□ -1.45
RHBDL3P58872 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RHBDL3P58872 AL024507.1-201ENST00000412741 274 ntBASIC6.01□□□□□ -1.45
RHBDL3P58872 AL121878.1-201ENST00000418638 859 ntBASIC6.01□□□□□ -1.45
RHBDL3P58872 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC6.01□□□□□ -1.45
RHBDL3P58872 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.01□□□□□ -1.45
RHBDL3P58872 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.01□□□□□ -1.45
RHBDL3P58872 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.01□□□□□ -1.45
RHBDL3P58872 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC6.01□□□□□ -1.45
RHBDL3P58872 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.01□□□□□ -1.45
RHBDL3P58872 AC063943.1-201ENST00000465434 453 ntBASIC6.01□□□□□ -1.45
RHBDL3P58872 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.01□□□□□ -1.45
RHBDL3P58872 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC6.01□□□□□ -1.45
RHBDL3P58872 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC6.01□□□□□ -1.45
RHBDL3P58872 RNA5SP392-201ENST00000516905 112 ntBASIC6.01□□□□□ -1.45
RHBDL3P58872 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.01□□□□□ -1.45
RHBDL3P58872 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.01□□□□□ -1.45
RHBDL3P58872 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.01□□□□□ -1.45
RHBDL3P58872 BNIP3P1-201ENST00000547295 580 ntBASIC6.01□□□□□ -1.45
RHBDL3P58872 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.01□□□□□ -1.45
RHBDL3P58872 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RHBDL3P58872 NF1P5-201ENST00000588287 448 ntBASIC6.01□□□□□ -1.45
RHBDL3P58872 NTAN1P1-201ENST00000603150 646 ntBASIC6.01□□□□□ -1.45
RHBDL3P58872 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.01□□□□□ -1.45
RHBDL3P58872 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.01□□□□□ -1.45
RHBDL3P58872 AC108359.1-201ENST00000616451 1211 ntBASIC6.01□□□□□ -1.45
RHBDL3P58872 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.01□□□□□ -1.45
RHBDL3P58872 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RHBDL3P58872 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RHBDL3P58872 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RHBDL3P58872 BCORP1-203ENST00000513194 5093 ntBASIC6.01□□□□□ -1.45
RHBDL3P58872 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.01□□□□□ -1.45
RHBDL3P58872 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
RHBDL3P58872 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
RHBDL3P58872 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RHBDL3P58872 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
RHBDL3P58872 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
RHBDL3P58872 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RHBDL3P58872 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
RHBDL3P58872 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6□□□□□ -1.45
RHBDL3P58872 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6□□□□□ -1.45
RHBDL3P58872 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6□□□□□ -1.45
RHBDL3P58872 RNA5SP453-201ENST00000362503 119 ntBASIC6□□□□□ -1.45
RHBDL3P58872 RNA5SP223-201ENST00000365174 120 ntBASIC6□□□□□ -1.45
RHBDL3P58872 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
RHBDL3P58872 OR1L6-202ENST00000373684 1044 ntBASIC6□□□□□ -1.45
RHBDL3P58872 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
RHBDL3P58872 RNU6-207P-201ENST00000384137 107 ntBASIC6□□□□□ -1.45
RHBDL3P58872 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC6□□□□□ -1.45
RHBDL3P58872 Z97832.1-201ENST00000402490 328 ntBASIC6□□□□□ -1.45
RHBDL3P58872 AL390316.1-201ENST00000406279 553 ntBASIC6□□□□□ -1.45
RHBDL3P58872 RNU2-65P-201ENST00000410162 185 ntBASIC6□□□□□ -1.45
RHBDL3P58872 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6□□□□□ -1.45
RHBDL3P58872 AL590139.1-201ENST00000416267 400 ntBASIC6□□□□□ -1.45
RHBDL3P58872 AC004074.1-201ENST00000421810 1063 ntBASIC6□□□□□ -1.45
RHBDL3P58872 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6□□□□□ -1.45
RHBDL3P58872 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6□□□□□ -1.45
RHBDL3P58872 AC007559.1-201ENST00000428736 355 ntBASIC6□□□□□ -1.45
RHBDL3P58872 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6□□□□□ -1.45
RHBDL3P58872 HMGN1P5-201ENST00000448591 263 ntBASIC6□□□□□ -1.45
RHBDL3P58872 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC6□□□□□ -1.45
RHBDL3P58872 OR52A4P-201ENST00000472867 958 ntBASIC6□□□□□ -1.45
RHBDL3P58872 RPS4XP6-201ENST00000477670 797 ntBASIC6□□□□□ -1.45
RHBDL3P58872 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC6□□□□□ -1.45
RHBDL3P58872 AC012339.2-201ENST00000523996 453 ntBASIC6□□□□□ -1.45
RHBDL3P58872 AC027369.5-201ENST00000533838 755 ntBASIC6□□□□□ -1.45
RHBDL3P58872 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6□□□□□ -1.45
RHBDL3P58872 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6□□□□□ -1.45
RHBDL3P58872 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6□□□□□ -1.45
RHBDL3P58872 UBE2FP2-201ENST00000566646 462 ntBASIC6□□□□□ -1.45
RHBDL3P58872 RN7SL290P-201ENST00000578661 300 ntBASIC6□□□□□ -1.45
RHBDL3P58872 MIR4330-201ENST00000579077 105 ntBASIC6□□□□□ -1.45
RHBDL3P58872 MIR4716-201ENST00000579628 84 ntBASIC6□□□□□ -1.45
RHBDL3P58872 PCNAP1-202ENST00000595299 752 ntBASIC6□□□□□ -1.45
RHBDL3P58872 AC087283.1-201ENST00000604029 1074 ntBASIC6□□□□□ -1.45
RHBDL3P58872 AC005377.1-201ENST00000605126 456 ntBASIC6□□□□□ -1.45
RHBDL3P58872 AL121890.3-201ENST00000618494 516 ntBASIC6□□□□□ -1.45
RHBDL3P58872 AL049777.1-201ENST00000622740 518 ntBASIC6□□□□□ -1.45
RHBDL3P58872 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6□□□□□ -1.45
RHBDL3P58872 AC006927.2-201ENST00000639256 389 ntBASIC6□□□□□ -1.45
RHBDL3P58872 MTCO1P6-201ENST00000481192 1384 ntBASIC6□□□□□ -1.45
RHBDL3P58872 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RHBDL3P58872 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6□□□□□ -1.45
RHBDL3P58872 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6□□□□□ -1.45
RHBDL3P58872 NSRP1P1-201ENST00000444067 1693 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms