Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.42□□□□□ -1.7
PKNOX1P55347 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PKNOX1P55347 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PKNOX1P55347 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PKNOX1P55347 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
PKNOX1P55347 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PKNOX1P55347 Z98755.1-201ENST00000407015 1384 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 MAPK10-304ENST00000641341 3984 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.41□□□□□ -1.7
PKNOX1P55347 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.41□□□□□ -1.7
PKNOX1P55347 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PKNOX1P55347 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
PKNOX1P55347 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PKNOX1P55347 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PKNOX1P55347 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PKNOX1P55347 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PKNOX1P55347 OR10J6P-201ENST00000289731 930 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PKNOX1P55347 RNU1-63P-201ENST00000383902 164 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 SNORA51.8-201ENST00000384234 132 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 AL078604.1-201ENST00000404609 466 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 ATG4AP1-201ENST00000416893 538 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PKNOX1P55347 AC004074.1-201ENST00000421810 1063 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 AC093084.1-201ENST00000424233 687 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 CENPIP1-201ENST00000425713 902 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PKNOX1P55347 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.41□□□□□ -1.7
PKNOX1P55347 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.41□□□□□ -1.7
PKNOX1P55347 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.41□□□□□ -1.7
PKNOX1P55347 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.41□□□□□ -1.7
PKNOX1P55347 CCRL1P1-201ENST00000449542 1053 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 AC022431.1-201ENST00000450941 438 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PKNOX1P55347 VN1R32P-201ENST00000452234 905 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PKNOX1P55347 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.41□□□□□ -1.7
PKNOX1P55347 IGLV2-34-201ENST00000490007 283 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.41□□□□□ -1.7
PKNOX1P55347 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.41□□□□□ -1.7
PKNOX1P55347 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PKNOX1P55347 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.41□□□□□ -1.7
PKNOX1P55347 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.41□□□□□ -1.7
PKNOX1P55347 SULT1C2P2-201ENST00000562517 294 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.41□□□□□ -1.7
PKNOX1P55347 AC103792.1-201ENST00000603591 919 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.41□□□□□ -1.7
PKNOX1P55347 MIR6862-1-201ENST00000613016 70 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 AL512624.1-201ENST00000613638 469 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 MIR6862-2-201ENST00000614755 70 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 MIR6729-201ENST00000618194 65 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 MIR6853-201ENST00000619642 74 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 AP002967.1-201ENST00000624203 539 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.41□□□□□ -1.7
PKNOX1P55347 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
PKNOX1P55347 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PKNOX1P55347 NXPH1-205ENST00000602349 1953 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 AC016588.2-201ENST00000632484 3021 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PKNOX1P55347 AC105074.1-201ENST00000623380 3095 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 AC109780.1-201ENST00000451768 1344 ntBASIC4.41□□□□□ -1.7
PKNOX1P55347 AC139769.1-204ENST00000472297 1931 ntBASIC4.4□□□□□ -1.7
PKNOX1P55347 LINC00622-201ENST00000562811 1570 ntBASIC4.4□□□□□ -1.7
PKNOX1P55347 AC110792.3-201ENST00000595906 1614 ntBASIC4.4□□□□□ -1.7
PKNOX1P55347 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
PKNOX1P55347 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
PKNOX1P55347 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PKNOX1P55347 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PKNOX1P55347 RNU4-7P-201ENST00000364758 141 ntBASIC4.4□□□□□ -1.71
PKNOX1P55347 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.4□□□□□ -1.71
PKNOX1P55347 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.4□□□□□ -1.71
PKNOX1P55347 VN1R8P-201ENST00000407739 893 ntBASIC4.4□□□□□ -1.71
PKNOX1P55347 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.4□□□□□ -1.71
PKNOX1P55347 RFESDP1-201ENST00000422350 461 ntBASIC4.4□□□□□ -1.71
PKNOX1P55347 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.4□□□□□ -1.71
PKNOX1P55347 SKP1P3-201ENST00000429280 487 ntBASIC4.4□□□□□ -1.71
PKNOX1P55347 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.4□□□□□ -1.71
PKNOX1P55347 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.4□□□□□ -1.71
PKNOX1P55347 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.4□□□□□ -1.71
PKNOX1P55347 LARP7P4-201ENST00000481075 878 ntBASIC4.4□□□□□ -1.71
PKNOX1P55347 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PKNOX1P55347 ATG10-AS1-201ENST00000504846 648 ntBASIC4.4□□□□□ -1.71
PKNOX1P55347 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PKNOX1P55347 AC117525.1-201ENST00000515228 503 ntBASIC4.4□□□□□ -1.71
PKNOX1P55347 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.4□□□□□ -1.71
PKNOX1P55347 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PKNOX1P55347 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.4□□□□□ -1.71
PKNOX1P55347 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.4□□□□□ -1.71
PKNOX1P55347 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.4□□□□□ -1.71
PKNOX1P55347 AC090181.2-201ENST00000602975 672 ntBASIC4.4□□□□□ -1.71
PKNOX1P55347 AC010201.1-201ENST00000605051 540 ntBASIC4.4□□□□□ -1.71
PKNOX1P55347 AC007620.3-201ENST00000608131 497 ntBASIC4.4□□□□□ -1.71
PKNOX1P55347 AC015813.4-201ENST00000610469 179 ntBASIC4.4□□□□□ -1.71
PKNOX1P55347 RMST_5.1-201ENST00000618704 126 ntBASIC4.4□□□□□ -1.71
PKNOX1P55347 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
PKNOX1P55347 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.4□□□□□ -1.71
PKNOX1P55347 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.4□□□□□ -1.71
PKNOX1P55347 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PKNOX1P55347 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms