Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AL133372.1-201ENST00000493565 745 ntBASIC4.45□□□□□ -1.7
CXCL12P48061 RPS27AP13-201ENST00000498403 237 ntBASIC4.45□□□□□ -1.7
CXCL12P48061 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.45□□□□□ -1.7
CXCL12P48061 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL12P48061 AC108064.1-201ENST00000513791 460 ntBASIC4.45□□□□□ -1.7
CXCL12P48061 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.45□□□□□ -1.7
CXCL12P48061 AC021733.2-201ENST00000518830 497 ntBASIC4.45□□□□□ -1.7
CXCL12P48061 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.45□□□□□ -1.7
CXCL12P48061 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.45□□□□□ -1.7
CXCL12P48061 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.45□□□□□ -1.7
CXCL12P48061 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.45□□□□□ -1.7
CXCL12P48061 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.45□□□□□ -1.7
CXCL12P48061 ADAD1P2-201ENST00000588476 646 ntBASIC4.45□□□□□ -1.7
CXCL12P48061 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.45□□□□□ -1.7
CXCL12P48061 AC024220.1-201ENST00000603675 484 ntBASIC4.45□□□□□ -1.7
CXCL12P48061 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.45□□□□□ -1.7
CXCL12P48061 MIR6875-201ENST00000617506 72 ntBASIC4.45□□□□□ -1.7
CXCL12P48061 AC138965.3-201ENST00000623875 498 ntBASIC4.45□□□□□ -1.7
CXCL12P48061 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL12P48061 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL12P48061 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL12P48061 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL12P48061 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.45□□□□□ -1.7
CXCL12P48061 AC104623.2-202ENST00000623477 4002 ntBASIC4.45□□□□□ -1.7
CXCL12P48061 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL12P48061 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL12P48061 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL12P48061 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL12P48061 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.45□□□□□ -1.7
CXCL12P48061 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.45□□□□□ -1.7
CXCL12P48061 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL12P48061 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CXCL12P48061 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CXCL12P48061 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL12P48061 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL12P48061 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL12P48061 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL12P48061 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.44□□□□□ -1.7
CXCL12P48061 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.44□□□□□ -1.7
CXCL12P48061 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL12P48061 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL12P48061 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL12P48061 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CXCL12P48061 CYCSP19-201ENST00000411715 316 ntBASIC4.44□□□□□ -1.7
CXCL12P48061 NRBF2P2-201ENST00000413087 861 ntBASIC4.44□□□□□ -1.7
CXCL12P48061 RPL6P29-201ENST00000414863 865 ntBASIC4.44□□□□□ -1.7
CXCL12P48061 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.44□□□□□ -1.7
CXCL12P48061 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL12P48061 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.44□□□□□ -1.7
CXCL12P48061 AC111000.5-201ENST00000506559 1178 ntBASIC4.44□□□□□ -1.7
CXCL12P48061 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.44□□□□□ -1.7
CXCL12P48061 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.44□□□□□ -1.7
CXCL12P48061 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.44□□□□□ -1.7
CXCL12P48061 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.44□□□□□ -1.7
CXCL12P48061 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.44□□□□□ -1.7
CXCL12P48061 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
CXCL12P48061 RN7SL600P-201ENST00000581811 299 ntBASIC4.44□□□□□ -1.7
CXCL12P48061 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.44□□□□□ -1.7
CXCL12P48061 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.44□□□□□ -1.7
CXCL12P48061 AC006116.5-201ENST00000591936 559 ntBASIC4.44□□□□□ -1.7
CXCL12P48061 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.44□□□□□ -1.7
CXCL12P48061 BPIFA4P-203ENST00000603168 689 ntBASIC4.44□□□□□ -1.7
CXCL12P48061 AC025175.1-201ENST00000606482 759 ntBASIC4.44□□□□□ -1.7
CXCL12P48061 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.44□□□□□ -1.7
CXCL12P48061 AC112200.1-201ENST00000625015 234 ntBASIC4.44□□□□□ -1.7
CXCL12P48061 CDRT1-208ENST00000630868 794 ntBASIC4.44□□□□□ -1.7
CXCL12P48061 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
CXCL12P48061 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL12P48061 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL12P48061 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.44□□□□□ -1.7
CXCL12P48061 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL12P48061 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
CXCL12P48061 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.44□□□□□ -1.7
CXCL12P48061 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL12P48061 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL12P48061 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL12P48061 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.44□□□□□ -1.7
CXCL12P48061 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CXCL12P48061 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL12P48061 AP001029.2-203ENST00000589795 4910 ntBASIC4.43□□□□□ -1.7
CXCL12P48061 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
CXCL12P48061 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL12P48061 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL12P48061 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL12P48061 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL12P48061 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL12P48061 RNU6-249P-201ENST00000363016 102 ntBASIC4.43□□□□□ -1.7
CXCL12P48061 SNORA70.4-201ENST00000365509 134 ntBASIC4.43□□□□□ -1.7
CXCL12P48061 SNORA11.1-201ENST00000408133 129 ntBASIC4.43□□□□□ -1.7
CXCL12P48061 AL139095.3-201ENST00000419672 1203 ntBASIC4.43□□□□□ -1.7
CXCL12P48061 MRPL50P1-201ENST00000431951 384 ntBASIC4.43□□□□□ -1.7
CXCL12P48061 BTF3P10-201ENST00000433415 495 ntBASIC4.43□□□□□ -1.7
CXCL12P48061 AC007389.2-201ENST00000434630 306 ntBASIC4.43□□□□□ -1.7
CXCL12P48061 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.43□□□□□ -1.7
CXCL12P48061 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.43□□□□□ -1.7
CXCL12P48061 RN7SL812P-201ENST00000493791 279 ntBASIC4.43□□□□□ -1.7
CXCL12P48061 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.43□□□□□ -1.7
CXCL12P48061 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CXCL12P48061 RNA5SP49-201ENST00000516450 115 ntBASIC4.43□□□□□ -1.7
CXCL12P48061 AC105233.3-201ENST00000531125 744 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms