Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RNU1-44P-201ENST00000384453 163 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 MIR195-201ENST00000385194 87 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 SNORA79B-201ENST00000410557 148 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 AC002524.1-201ENST00000411687 547 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 AC011933.1-201ENST00000413334 321 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 RPL7P33-201ENST00000444159 742 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 RPS27AP15-201ENST00000447672 466 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 AC009963.2-201ENST00000453431 138 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 AC116533.1-201ENST00000459748 321 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 RN7SL303P-201ENST00000469773 251 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 AC109327.1-201ENST00000471666 403 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.73□□□□□ -1.65
TNFSF9P41273 AL161747.1-201ENST00000480068 358 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.73□□□□□ -1.65
TNFSF9P41273 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.73□□□□□ -1.65
TNFSF9P41273 AP002981.1-201ENST00000517692 975 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.73□□□□□ -1.65
TNFSF9P41273 CYCSP28-201ENST00000534284 321 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
TNFSF9P41273 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.73□□□□□ -1.65
TNFSF9P41273 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TNFSF9P41273 RPL23AP97-201ENST00000568955 471 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 MIR4675-201ENST00000577898 77 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 AC005034.4-201ENST00000603612 899 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 AC091979.2-201ENST00000607514 214 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 AL353726.1-201ENST00000614041 1000 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 AC140479.6-201ENST00000633535 357 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 AL139254.3-201ENST00000641097 674 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.73□□□□□ -1.65
TNFSF9P41273 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
TNFSF9P41273 AC010266.2-201ENST00000564741 3255 ntBASIC4.73□□□□□ -1.65
TNFSF9P41273 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNFSF9P41273 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.72□□□□□ -1.65
TNFSF9P41273 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.72□□□□□ -1.65
TNFSF9P41273 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNFSF9P41273 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNFSF9P41273 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TNFSF9P41273 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.72□□□□□ -1.65
TNFSF9P41273 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.72□□□□□ -1.65
TNFSF9P41273 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNFSF9P41273 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNFSF9P41273 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.72□□□□□ -1.65
TNFSF9P41273 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.72□□□□□ -1.65
TNFSF9P41273 AC098592.2-201ENST00000413158 265 ntBASIC4.72□□□□□ -1.65
TNFSF9P41273 VN1R31P-201ENST00000417498 730 ntBASIC4.72□□□□□ -1.65
TNFSF9P41273 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.72□□□□□ -1.65
TNFSF9P41273 MFSD13B-201ENST00000420133 1290 ntBASIC4.72□□□□□ -1.65
TNFSF9P41273 AC234779.1-201ENST00000425910 285 ntBASIC4.72□□□□□ -1.65
TNFSF9P41273 NPM1P33-201ENST00000438918 872 ntBASIC4.72□□□□□ -1.65
TNFSF9P41273 RPL7P22-201ENST00000466005 733 ntBASIC4.72□□□□□ -1.65
TNFSF9P41273 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.72□□□□□ -1.65
TNFSF9P41273 RN7SL691P-201ENST00000494487 301 ntBASIC4.72□□□□□ -1.65
TNFSF9P41273 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.72□□□□□ -1.65
TNFSF9P41273 AC106806.2-201ENST00000509365 500 ntBASIC4.72□□□□□ -1.65
TNFSF9P41273 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TNFSF9P41273 AP000859.1-201ENST00000525536 307 ntBASIC4.72□□□□□ -1.65
TNFSF9P41273 EIF4EP5-201ENST00000528228 640 ntBASIC4.72□□□□□ -1.65
TNFSF9P41273 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNFSF9P41273 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.72□□□□□ -1.65
TNFSF9P41273 PSMB7P1-201ENST00000556349 514 ntBASIC4.72□□□□□ -1.65
TNFSF9P41273 AC069366.1-201ENST00000583159 838 ntBASIC4.72□□□□□ -1.65
TNFSF9P41273 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.72□□□□□ -1.65
TNFSF9P41273 AC010487.1-201ENST00000594408 1172 ntBASIC4.72□□□□□ -1.65
TNFSF9P41273 ARF4P1-201ENST00000605447 541 ntBASIC4.72□□□□□ -1.65
TNFSF9P41273 AL021997.2-201ENST00000615674 271 ntBASIC4.72□□□□□ -1.65
TNFSF9P41273 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.72□□□□□ -1.65
TNFSF9P41273 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNFSF9P41273 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TNFSF9P41273 AC074140.1-201ENST00000621617 208 ntBASIC4.72□□□□□ -1.65
TNFSF9P41273 AC140113.4-201ENST00000622087 222 ntBASIC4.72□□□□□ -1.65
TNFSF9P41273 AL445363.3-201ENST00000623080 671 ntBASIC4.72□□□□□ -1.65
TNFSF9P41273 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNFSF9P41273 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNFSF9P41273 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.72□□□□□ -1.65
TNFSF9P41273 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
TNFSF9P41273 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNFSF9P41273 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNFSF9P41273 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNFSF9P41273 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.72□□□□□ -1.65
TNFSF9P41273 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNFSF9P41273 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNFSF9P41273 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TNFSF9P41273 AP001642.1-201ENST00000624727 2117 ntBASIC4.72□□□□□ -1.65
TNFSF9P41273 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TNFSF9P41273 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TNFSF9P41273 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.71□□□□□ -1.65
TNFSF9P41273 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.71□□□□□ -1.65
TNFSF9P41273 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.71□□□□□ -1.66
TNFSF9P41273 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
TNFSF9P41273 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TNFSF9P41273 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.71□□□□□ -1.66
TNFSF9P41273 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.71□□□□□ -1.66
TNFSF9P41273 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TNFSF9P41273 SNORA11-201ENST00000408789 128 ntBASIC4.71□□□□□ -1.66
TNFSF9P41273 MIR1911-201ENST00000410783 80 ntBASIC4.71□□□□□ -1.66
TNFSF9P41273 AL121878.1-201ENST00000418638 859 ntBASIC4.71□□□□□ -1.66
TNFSF9P41273 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TNFSF9P41273 SETP10-201ENST00000424368 814 ntBASIC4.71□□□□□ -1.66
TNFSF9P41273 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.71□□□□□ -1.66
TNFSF9P41273 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms