Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A2P12110 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.85□□□□□ -1.47
COL6A2P12110 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A2P12110 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
COL6A2P12110 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A2P12110 AC239868.2-201ENST00000564237 4527 ntBASIC5.85□□□□□ -1.47
COL6A2P12110 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A2P12110 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.85□□□□□ -1.47
COL6A2P12110 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
COL6A2P12110 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
COL6A2P12110 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A2P12110 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.84□□□□□ -1.47
COL6A2P12110 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL6A2P12110 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL6A2P12110 AC004076.2-201ENST00000620532 3323 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL6A2P12110 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL6A2P12110 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.84□□□□□ -1.47
COL6A2P12110 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
COL6A2P12110 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.84□□□□□ -1.47
COL6A2P12110 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL6A2P12110 RNU1-134P-201ENST00000362935 165 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
COL6A2P12110 MIR621-201ENST00000384919 96 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 AC114814.2-201ENST00000419195 485 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 RPL24P2-201ENST00000421023 475 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 RPL7AP51-201ENST00000422016 760 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.84□□□□□ -1.47
COL6A2P12110 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 RPL31P54-201ENST00000429803 370 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.84□□□□□ -1.47
COL6A2P12110 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.84□□□□□ -1.47
COL6A2P12110 OR2B8P-201ENST00000432841 938 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
COL6A2P12110 AL445928.1-201ENST00000435545 222 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.84□□□□□ -1.47
COL6A2P12110 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.84□□□□□ -1.47
COL6A2P12110 RNA5SP269-201ENST00000459032 137 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 RNU1-88P-201ENST00000459274 128 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 RPS7P10-201ENST00000464254 603 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 AC006539.1-201ENST00000481419 501 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 RPL7P41-201ENST00000485823 957 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
COL6A2P12110 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL6A2P12110 AC113430.1-201ENST00000506872 718 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 HMGN1P16-201ENST00000508308 283 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.84□□□□□ -1.47
COL6A2P12110 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.84□□□□□ -1.47
COL6A2P12110 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.84□□□□□ -1.47
COL6A2P12110 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.84□□□□□ -1.47
COL6A2P12110 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.84□□□□□ -1.47
COL6A2P12110 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
COL6A2P12110 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.84□□□□□ -1.47
COL6A2P12110 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.84□□□□□ -1.47
COL6A2P12110 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.84□□□□□ -1.47
COL6A2P12110 MIR4701-201ENST00000583094 63 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.84□□□□□ -1.47
COL6A2P12110 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.84□□□□□ -1.47
COL6A2P12110 SMIM12P1-201ENST00000603004 274 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 AC012368.3-201ENST00000604190 219 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.84□□□□□ -1.47
COL6A2P12110 AC090525.3-201ENST00000605601 189 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 AC012360.2-201ENST00000609349 391 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 AC106028.5-201ENST00000610332 395 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 AC015712.7-201ENST00000615211 635 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
COL6A2P12110 AC005618.4-201ENST00000625053 554 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 AC099654.6-201ENST00000636487 512 ntBASIC5.84□□□□□ -1.47
COL6A2P12110 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
COL6A2P12110 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL6A2P12110 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.84□□□□□ -1.47
COL6A2P12110 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL6A2P12110 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL6A2P12110 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
COL6A2P12110 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL6A2P12110 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
COL6A2P12110 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
COL6A2P12110 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
COL6A2P12110 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
COL6A2P12110 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
COL6A2P12110 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
COL6A2P12110 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
COL6A2P12110 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.83□□□□□ -1.48
COL6A2P12110 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.83□□□□□ -1.48
COL6A2P12110 RBPJP7-201ENST00000442803 1447 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 RBPJP5-201ENST00000449433 1447 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
COL6A2P12110 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.83□□□□□ -1.48
COL6A2P12110 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL6A2P12110 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL6A2P12110 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL6A2P12110 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL6A2P12110 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL6A2P12110 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
COL6A2P12110 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
COL6A2P12110 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
COL6A2P12110 Y_RNA.359-201ENST00000365498 102 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.83□□□□□ -1.48
COL6A2P12110 RPS4XP5-201ENST00000419038 768 ntBASIC5.83□□□□□ -1.48
COL6A2P12110 AK4P4-201ENST00000419465 646 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms