Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCNAP12004 AL592182.3-201ENST00000642132 3304 ntBASIC4.98□□□□□ -1.61
PCNAP12004 MAPK10-304ENST00000641341 3984 ntBASIC4.98□□□□□ -1.61
PCNAP12004 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PCNAP12004 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
PCNAP12004 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCNAP12004 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCNAP12004 U3.3-201ENST00000362986 216 ntBASIC4.98□□□□□ -1.61
PCNAP12004 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCNAP12004 HMGB3P31-201ENST00000413333 595 ntBASIC4.98□□□□□ -1.61
PCNAP12004 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.98□□□□□ -1.61
PCNAP12004 OR6K4P-201ENST00000423179 955 ntBASIC4.98□□□□□ -1.61
PCNAP12004 AC108075.1-201ENST00000424692 529 ntBASIC4.98□□□□□ -1.61
PCNAP12004 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.98□□□□□ -1.61
PCNAP12004 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.98□□□□□ -1.61
PCNAP12004 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.98□□□□□ -1.61
PCNAP12004 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.98□□□□□ -1.61
PCNAP12004 GTF3AP5-201ENST00000442645 697 ntBASIC4.98□□□□□ -1.61
PCNAP12004 TRY2P-201ENST00000448860 689 ntBASIC4.98□□□□□ -1.61
PCNAP12004 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.98□□□□□ -1.61
PCNAP12004 OFD1P3Y-201ENST00000453312 783 ntBASIC4.98□□□□□ -1.61
PCNAP12004 AL645937.3-201ENST00000453647 936 ntBASIC4.98□□□□□ -1.61
PCNAP12004 RPL7P48-201ENST00000461513 746 ntBASIC4.98□□□□□ -1.61
PCNAP12004 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.98□□□□□ -1.61
PCNAP12004 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.98□□□□□ -1.61
PCNAP12004 RPS4XP6-201ENST00000477670 797 ntBASIC4.98□□□□□ -1.61
PCNAP12004 RPL7P6-201ENST00000480903 738 ntBASIC4.98□□□□□ -1.61
PCNAP12004 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.98□□□□□ -1.61
PCNAP12004 AC106872.4-201ENST00000510050 523 ntBASIC4.98□□□□□ -1.61
PCNAP12004 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.98□□□□□ -1.61
PCNAP12004 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.98□□□□□ -1.61
PCNAP12004 snoU109.6-201ENST00000516831 118 ntBASIC4.98□□□□□ -1.61
PCNAP12004 AP006245.2-201ENST00000522004 300 ntBASIC4.98□□□□□ -1.61
PCNAP12004 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.98□□□□□ -1.61
PCNAP12004 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.98□□□□□ -1.61
PCNAP12004 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.98□□□□□ -1.61
PCNAP12004 AC008083.2-201ENST00000546707 476 ntBASIC4.98□□□□□ -1.61
PCNAP12004 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.98□□□□□ -1.61
PCNAP12004 AGGF1P5-201ENST00000567900 919 ntBASIC4.98□□□□□ -1.61
PCNAP12004 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.98□□□□□ -1.61
PCNAP12004 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.98□□□□□ -1.61
PCNAP12004 AC093673.2-201ENST00000609674 331 ntBASIC4.98□□□□□ -1.61
PCNAP12004 AL157392.4-201ENST00000609756 345 ntBASIC4.98□□□□□ -1.61
PCNAP12004 AC011472.4-201ENST00000615848 491 ntBASIC4.98□□□□□ -1.61
PCNAP12004 AC073569.3-201ENST00000619055 682 ntBASIC4.98□□□□□ -1.61
PCNAP12004 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.98□□□□□ -1.61
PCNAP12004 AP002505.2-201ENST00000623585 696 ntBASIC4.98□□□□□ -1.61
PCNAP12004 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PCNAP12004 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.98□□□□□ -1.61
PCNAP12004 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
PCNAP12004 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCNAP12004 AL034370.1-201ENST00000397254 1590 ntBASIC4.98□□□□□ -1.61
PCNAP12004 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCNAP12004 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCNAP12004 AL451142.2-201ENST00000429076 2090 ntBASIC4.98□□□□□ -1.61
PCNAP12004 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCNAP12004 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.98□□□□□ -1.61
PCNAP12004 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
PCNAP12004 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCNAP12004 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PCNAP12004 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PCNAP12004 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.97□□□□□ -1.61
PCNAP12004 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCNAP12004 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.97□□□□□ -1.61
PCNAP12004 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCNAP12004 PHKBP1-201ENST00000450951 1951 ntBASIC4.97□□□□□ -1.61
PCNAP12004 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCNAP12004 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCNAP12004 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCNAP12004 RN7SKP162-201ENST00000363605 345 ntBASIC4.97□□□□□ -1.61
PCNAP12004 RNA5SP27-201ENST00000363839 119 ntBASIC4.97□□□□□ -1.61
PCNAP12004 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.97□□□□□ -1.61
PCNAP12004 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCNAP12004 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.97□□□□□ -1.61
PCNAP12004 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCNAP12004 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PCNAP12004 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCNAP12004 MIR1271-201ENST00000408537 86 ntBASIC4.97□□□□□ -1.61
PCNAP12004 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCNAP12004 RN7SKP16-201ENST00000410180 299 ntBASIC4.97□□□□□ -1.61
PCNAP12004 AC013404.1-201ENST00000413068 249 ntBASIC4.97□□□□□ -1.61
PCNAP12004 AC105402.1-201ENST00000413336 545 ntBASIC4.97□□□□□ -1.61
PCNAP12004 LINC01881-201ENST00000416103 412 ntBASIC4.97□□□□□ -1.61
PCNAP12004 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.97□□□□□ -1.61
PCNAP12004 EIF4A1P1-201ENST00000420241 934 ntBASIC4.97□□□□□ -1.61
PCNAP12004 AL358176.3-201ENST00000420757 454 ntBASIC4.97□□□□□ -1.61
PCNAP12004 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.97□□□□□ -1.61
PCNAP12004 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCNAP12004 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.97□□□□□ -1.61
PCNAP12004 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.97□□□□□ -1.61
PCNAP12004 AC099063.2-201ENST00000446360 662 ntBASIC4.97□□□□□ -1.61
PCNAP12004 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.97□□□□□ -1.61
PCNAP12004 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.97□□□□□ -1.61
PCNAP12004 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.97□□□□□ -1.61
PCNAP12004 Z95152.1-201ENST00000453556 656 ntBASIC4.97□□□□□ -1.61
PCNAP12004 GTF2IP12-201ENST00000456547 356 ntBASIC4.97□□□□□ -1.61
PCNAP12004 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.97□□□□□ -1.61
PCNAP12004 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCNAP12004 AC097173.1-201ENST00000505862 819 ntBASIC4.97□□□□□ -1.61
PCNAP12004 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms