Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 CASC19-243ENST00000641588 1546 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 AC092326.2-201ENST00000624772 1561 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 RNU6-181P-201ENST00000363225 107 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 RNU6-931P-201ENST00000363850 107 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 RNU1-24P-201ENST00000364285 165 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 RN7SKP124-201ENST00000364730 341 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 BPHL-201ENST00000380368 797 ntTSL 5 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 Y_RNA.554-201ENST00000384672 102 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 CEACAMP8-201ENST00000413902 580 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 OR6E1P-201ENST00000414424 923 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 AL022400.1-201ENST00000423946 935 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 CFL1P1-202ENST00000432948 411 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 MTND3P21-201ENST00000433774 331 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 AL445928.1-201ENST00000435545 222 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 SPRYD7P1-201ENST00000443861 570 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 MTCO2P25-201ENST00000447065 681 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 AC002075.1-201ENST00000457396 676 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 HSPE1P23-201ENST00000509838 286 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 RNU6-416P-201ENST00000516265 103 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 MIR5095-201ENST00000578844 88 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 AL159169.3-201ENST00000608871 561 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 AC025594.3-201ENST00000613068 790 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 AC023158.2-201ENST00000614876 543 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 AL157786.1-207ENST00000627771 695 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 SNORA62.2-201ENST00000364672 152 ntBASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 RNU6-171P-201ENST00000384354 107 ntBASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 AC008171.1-201ENST00000395058 200 ntBASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 RNU4-34P-201ENST00000410431 124 ntBASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 AP000534.2-201ENST00000412729 568 ntBASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 AC009480.2-201ENST00000422916 432 ntBASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 NPM1P22-201ENST00000427761 952 ntBASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 RPS7P3-201ENST00000443360 580 ntBASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 AC112653.1-201ENST00000443851 386 ntBASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 AC104164.1-201ENST00000460282 590 ntBASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 RN7SL72P-201ENST00000460697 269 ntBASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 AL121769.1-201ENST00000469473 401 ntBASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 TRBV8-2-201ENST00000475637 270 ntBASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 AC109486.1-201ENST00000486833 374 ntBASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 OR4C2P-201ENST00000530855 1064 ntBASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 OR5AL2P-201ENST00000532185 920 ntBASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 AC074029.1-201ENST00000552531 1044 ntBASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 AC004825.1-201ENST00000555068 586 ntBASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 AC008115.3-201ENST00000614874 549 ntBASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 DUXAP9-208ENST00000622815 614 ntBASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC7.93□□□□□ -1.14
CSB-PGBD3P0DP91 IMMTP1-201ENST00000435590 2219 ntBASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms