Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
UBCP0CG48 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
UBCP0CG48 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
UBCP0CG48 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.1□□□□□ -1.75
UBCP0CG48 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
UBCP0CG48 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.09□□□□□ -1.75
UBCP0CG48 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.09□□□□□ -1.75
UBCP0CG48 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
UBCP0CG48 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
UBCP0CG48 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
UBCP0CG48 AC022893.2-201ENST00000564832 3296 ntBASIC4.09□□□□□ -1.75
UBCP0CG48 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
UBCP0CG48 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
UBCP0CG48 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
UBCP0CG48 RN7SKP216-201ENST00000411050 312 ntBASIC4.09□□□□□ -1.75
UBCP0CG48 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.09□□□□□ -1.75
UBCP0CG48 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.09□□□□□ -1.75
UBCP0CG48 AC073464.3-201ENST00000422564 712 ntBASIC4.09□□□□□ -1.75
UBCP0CG48 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.09□□□□□ -1.75
UBCP0CG48 RPL21P43-201ENST00000425440 472 ntBASIC4.09□□□□□ -1.75
UBCP0CG48 PRPF38AP2-201ENST00000438179 851 ntBASIC4.09□□□□□ -1.75
UBCP0CG48 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.09□□□□□ -1.75
UBCP0CG48 AC092647.3-201ENST00000443044 633 ntBASIC4.09□□□□□ -1.75
UBCP0CG48 AC106872.4-201ENST00000510050 523 ntBASIC4.09□□□□□ -1.75
UBCP0CG48 RN7SKP147-201ENST00000517154 244 ntBASIC4.09□□□□□ -1.75
UBCP0CG48 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.09□□□□□ -1.75
UBCP0CG48 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.09□□□□□ -1.75
UBCP0CG48 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.09□□□□□ -1.75
UBCP0CG48 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
UBCP0CG48 AC069240.1-201ENST00000548774 375 ntBASIC4.09□□□□□ -1.75
UBCP0CG48 MIR4716-201ENST00000579628 84 ntBASIC4.09□□□□□ -1.75
UBCP0CG48 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.09□□□□□ -1.75
UBCP0CG48 AC091178.1-203ENST00000584586 279 ntBASIC4.09□□□□□ -1.75
UBCP0CG48 RPL7P50-201ENST00000600588 727 ntBASIC4.09□□□□□ -1.75
UBCP0CG48 AC008638.3-201ENST00000603341 463 ntBASIC4.09□□□□□ -1.75
UBCP0CG48 HMGB1P51-201ENST00000605166 638 ntBASIC4.09□□□□□ -1.75
UBCP0CG48 AC008966.2-201ENST00000606157 453 ntBASIC4.09□□□□□ -1.75
UBCP0CG48 AC005021.1-201ENST00000608730 355 ntBASIC4.09□□□□□ -1.75
UBCP0CG48 FAM27B-201ENST00000610601 213 ntBASIC4.09□□□□□ -1.75
UBCP0CG48 AC016957.2-201ENST00000616998 848 ntBASIC4.09□□□□□ -1.75
UBCP0CG48 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.09□□□□□ -1.75
UBCP0CG48 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.09□□□□□ -1.75
UBCP0CG48 MIR4302-201ENST00000638058 60 ntBASIC4.09□□□□□ -1.75
UBCP0CG48 AC015813.6-201ENST00000624409 5808 ntBASIC4.09□□□□□ -1.75
UBCP0CG48 NCLP2-201ENST00000416078 1462 ntBASIC4.09□□□□□ -1.75
UBCP0CG48 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
UBCP0CG48 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
UBCP0CG48 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
UBCP0CG48 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
UBCP0CG48 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
UBCP0CG48 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
UBCP0CG48 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
UBCP0CG48 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
UBCP0CG48 AC007390.2-201ENST00000606229 3803 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBCP0CG48 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
UBCP0CG48 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBCP0CG48 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
UBCP0CG48 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBCP0CG48 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
UBCP0CG48 RNU6-618P-201ENST00000363518 112 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 RNA5SP435-201ENST00000364044 108 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.08□□□□□ -1.76
UBCP0CG48 RNU6-891P-201ENST00000384280 111 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBCP0CG48 RNU1-82P-201ENST00000390851 165 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 AL645733.1-201ENST00000402250 217 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.08□□□□□ -1.76
UBCP0CG48 AL591848.1-201ENST00000413092 322 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 RPS26P13-201ENST00000419030 330 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
UBCP0CG48 RPS12P5-201ENST00000423449 371 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 AL645608.4-201ENST00000423619 154 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 AC073069.1-201ENST00000428657 441 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
UBCP0CG48 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.08□□□□□ -1.76
UBCP0CG48 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.08□□□□□ -1.76
UBCP0CG48 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.08□□□□□ -1.76
UBCP0CG48 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.08□□□□□ -1.76
UBCP0CG48 AC079168.2-201ENST00000453977 416 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 AURKAPS2-201ENST00000454983 333 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBCP0CG48 ATP5G1P3-201ENST00000463301 410 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.08□□□□□ -1.76
UBCP0CG48 MTND6P6-201ENST00000478031 263 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 RPL37AP8-201ENST00000494116 276 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.08□□□□□ -1.76
UBCP0CG48 AC098799.3-201ENST00000506095 438 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.08□□□□□ -1.76
UBCP0CG48 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
UBCP0CG48 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.08□□□□□ -1.76
UBCP0CG48 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.08□□□□□ -1.76
UBCP0CG48 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.08□□□□□ -1.76
UBCP0CG48 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.08□□□□□ -1.76
UBCP0CG48 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBCP0CG48 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.08□□□□□ -1.76
UBCP0CG48 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.08□□□□□ -1.76
UBCP0CG48 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms