Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC4P09017 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
HOXC4P09017 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC4P09017 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.44□□□□□ -1.7
HOXC4P09017 AC104118.1-201ENST00000607625 1589 ntBASIC4.44□□□□□ -1.7
HOXC4P09017 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC4P09017 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC4P09017 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
HOXC4P09017 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC4P09017 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
HOXC4P09017 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC4P09017 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC4P09017 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXC4P09017 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC4P09017 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC4P09017 AC025031.4-201ENST00000621248 3271 ntBASIC4.43□□□□□ -1.7
HOXC4P09017 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HOXC4P09017 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HOXC4P09017 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC4P09017 RNU6-1331P-201ENST00000363658 106 ntBASIC4.43□□□□□ -1.7
HOXC4P09017 AC068538.1-201ENST00000376856 336 ntBASIC4.43□□□□□ -1.7
HOXC4P09017 AC096644.3-201ENST00000416788 338 ntBASIC4.43□□□□□ -1.7
HOXC4P09017 RPS12P10-201ENST00000427031 377 ntBASIC4.43□□□□□ -1.7
HOXC4P09017 YY1P1-201ENST00000427625 668 ntBASIC4.43□□□□□ -1.7
HOXC4P09017 RPS29P17-201ENST00000430795 166 ntBASIC4.43□□□□□ -1.7
HOXC4P09017 AC011998.1-201ENST00000433403 117 ntBASIC4.43□□□□□ -1.7
HOXC4P09017 AL031584.1-201ENST00000447169 754 ntBASIC4.43□□□□□ -1.7
HOXC4P09017 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXC4P09017 EIF2S2P5-201ENST00000457635 968 ntBASIC4.43□□□□□ -1.7
HOXC4P09017 CYCSP34-201ENST00000458172 304 ntBASIC4.43□□□□□ -1.7
HOXC4P09017 RN7SL98P-201ENST00000462271 300 ntBASIC4.43□□□□□ -1.7
HOXC4P09017 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXC4P09017 AC026979.1-201ENST00000492525 396 ntBASIC4.43□□□□□ -1.7
HOXC4P09017 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXC4P09017 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXC4P09017 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXC4P09017 AF186190.1-201ENST00000517470 480 ntBASIC4.43□□□□□ -1.7
HOXC4P09017 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXC4P09017 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXC4P09017 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXC4P09017 MIR4697-201ENST00000582977 78 ntBASIC4.43□□□□□ -1.7
HOXC4P09017 AC124856.1-201ENST00000600819 896 ntBASIC4.43□□□□□ -1.7
HOXC4P09017 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC4P09017 AL445423.1-201ENST00000609941 536 ntBASIC4.43□□□□□ -1.7
HOXC4P09017 AL121890.3-201ENST00000618494 516 ntBASIC4.43□□□□□ -1.7
HOXC4P09017 MIR6891-201ENST00000618788 93 ntBASIC4.43□□□□□ -1.7
HOXC4P09017 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC4P09017 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
HOXC4P09017 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC4P09017 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC4P09017 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HOXC4P09017 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC4P09017 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC4P09017 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC4P09017 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC4P09017 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC4P09017 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC4P09017 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXC4P09017 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC4P09017 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
HOXC4P09017 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HOXC4P09017 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC4P09017 RNU1-130P-201ENST00000363930 160 ntBASIC4.42□□□□□ -1.7
HOXC4P09017 RN7SKP224-201ENST00000364140 325 ntBASIC4.42□□□□□ -1.7
HOXC4P09017 SNORA70.2-201ENST00000364506 135 ntBASIC4.42□□□□□ -1.7
HOXC4P09017 RNU6-1320P-201ENST00000390838 107 ntBASIC4.42□□□□□ -1.7
HOXC4P09017 RNU6-1269P-201ENST00000391139 107 ntBASIC4.42□□□□□ -1.7
HOXC4P09017 SNORA11F-201ENST00000408237 128 ntBASIC4.42□□□□□ -1.7
HOXC4P09017 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.42□□□□□ -1.7
HOXC4P09017 P2RY10P2-201ENST00000416730 913 ntBASIC4.42□□□□□ -1.7
HOXC4P09017 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC4P09017 AC091390.1-201ENST00000433904 331 ntBASIC4.42□□□□□ -1.7
HOXC4P09017 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXC4P09017 CBX1P1-201ENST00000440184 427 ntBASIC4.42□□□□□ -1.7
HOXC4P09017 AC073587.1-201ENST00000447093 876 ntBASIC4.42□□□□□ -1.7
HOXC4P09017 MORF4L1P4-201ENST00000450245 976 ntBASIC4.42□□□□□ -1.7
HOXC4P09017 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXC4P09017 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC4P09017 RNU6-599P-201ENST00000459383 107 ntBASIC4.42□□□□□ -1.7
HOXC4P09017 RNU6-1193P-201ENST00000459461 107 ntBASIC4.42□□□□□ -1.7
HOXC4P09017 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HOXC4P09017 RN7SL303P-201ENST00000469773 251 ntBASIC4.42□□□□□ -1.7
HOXC4P09017 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXC4P09017 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXC4P09017 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXC4P09017 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXC4P09017 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXC4P09017 AC010476.1-201ENST00000519111 851 ntBASIC4.42□□□□□ -1.7
HOXC4P09017 AC134698.5-201ENST00000519444 336 ntBASIC4.42□□□□□ -1.7
HOXC4P09017 MTND2P7-201ENST00000521337 640 ntBASIC4.42□□□□□ -1.7
HOXC4P09017 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC4P09017 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXC4P09017 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXC4P09017 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC4P09017 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
HOXC4P09017 RN7SL176P-201ENST00000580352 264 ntBASIC4.42□□□□□ -1.7
HOXC4P09017 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXC4P09017 AC091178.1-203ENST00000584586 279 ntBASIC4.42□□□□□ -1.7
HOXC4P09017 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXC4P09017 AL137072.1-201ENST00000603444 466 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms