Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
COL3A1P02461 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
COL3A1P02461 OR56B2P-201ENST00000317102 954 ntBASIC5.96□□□□□ -1.46
COL3A1P02461 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL3A1P02461 RNU4-23P-201ENST00000362839 140 ntBASIC5.96□□□□□ -1.46
COL3A1P02461 RNU6-883P-201ENST00000384597 107 ntBASIC5.96□□□□□ -1.46
COL3A1P02461 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.96□□□□□ -1.46
COL3A1P02461 AC009480.2-201ENST00000422916 432 ntBASIC5.96□□□□□ -1.46
COL3A1P02461 MTCO2P20-201ENST00000437339 673 ntBASIC5.96□□□□□ -1.46
COL3A1P02461 RPL23AP52-201ENST00000439311 478 ntBASIC5.96□□□□□ -1.46
COL3A1P02461 AC114495.1-201ENST00000441274 436 ntBASIC5.96□□□□□ -1.46
COL3A1P02461 RAD1P2-201ENST00000446414 663 ntBASIC5.96□□□□□ -1.46
COL3A1P02461 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.96□□□□□ -1.46
COL3A1P02461 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.96□□□□□ -1.46
COL3A1P02461 AL591473.1-201ENST00000464297 313 ntBASIC5.96□□□□□ -1.46
COL3A1P02461 AC103987.1-201ENST00000473394 348 ntBASIC5.96□□□□□ -1.46
COL3A1P02461 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.96□□□□□ -1.46
COL3A1P02461 PRELID3BP7-201ENST00000503606 469 ntBASIC5.96□□□□□ -1.46
COL3A1P02461 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.96□□□□□ -1.46
COL3A1P02461 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.96□□□□□ -1.46
COL3A1P02461 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.96□□□□□ -1.46
COL3A1P02461 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.96□□□□□ -1.46
COL3A1P02461 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.96□□□□□ -1.46
COL3A1P02461 RPL7P50-201ENST00000600588 727 ntBASIC5.96□□□□□ -1.46
COL3A1P02461 AC091057.2-201ENST00000602594 792 ntBASIC5.96□□□□□ -1.46
COL3A1P02461 AC002069.2-201ENST00000603580 883 ntBASIC5.96□□□□□ -1.46
COL3A1P02461 DUXAP3-201ENST00000603616 594 ntBASIC5.96□□□□□ -1.46
COL3A1P02461 AL354984.3-201ENST00000604803 325 ntBASIC5.96□□□□□ -1.46
COL3A1P02461 AC135803.1-201ENST00000608748 565 ntBASIC5.96□□□□□ -1.46
COL3A1P02461 AC074276.2-201ENST00000619891 348 ntBASIC5.96□□□□□ -1.46
COL3A1P02461 AC011944.2-201ENST00000624440 683 ntBASIC5.96□□□□□ -1.46
COL3A1P02461 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
COL3A1P02461 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
COL3A1P02461 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL3A1P02461 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
COL3A1P02461 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL3A1P02461 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL3A1P02461 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
COL3A1P02461 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.95□□□□□ -1.46
COL3A1P02461 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL3A1P02461 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL3A1P02461 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL3A1P02461 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
COL3A1P02461 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL3A1P02461 CASC19-261ENST00000641853 1638 ntBASIC5.95□□□□□ -1.46
COL3A1P02461 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL3A1P02461 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.95□□□□□ -1.46
COL3A1P02461 OR4K17-201ENST00000315543 1032 ntBASIC5.95□□□□□ -1.46
COL3A1P02461 ANAPC10P1-201ENST00000395991 556 ntBASIC5.95□□□□□ -1.46
COL3A1P02461 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.95□□□□□ -1.46
COL3A1P02461 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL3A1P02461 AC234779.1-201ENST00000425910 285 ntBASIC5.95□□□□□ -1.46
COL3A1P02461 MTND5P25-201ENST00000430499 799 ntBASIC5.95□□□□□ -1.46
COL3A1P02461 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.95□□□□□ -1.46
COL3A1P02461 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.95□□□□□ -1.46
COL3A1P02461 CYCSP34-201ENST00000458172 304 ntBASIC5.95□□□□□ -1.46
COL3A1P02461 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.95□□□□□ -1.46
COL3A1P02461 AC041039.1-201ENST00000485656 536 ntBASIC5.95□□□□□ -1.46
COL3A1P02461 AC083829.1-201ENST00000503756 657 ntBASIC5.95□□□□□ -1.46
COL3A1P02461 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.95□□□□□ -1.46
COL3A1P02461 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.95□□□□□ -1.46
COL3A1P02461 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.95□□□□□ -1.46
COL3A1P02461 AC138938.1-201ENST00000515431 782 ntBASIC5.95□□□□□ -1.46
COL3A1P02461 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.95□□□□□ -1.46
COL3A1P02461 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.95□□□□□ -1.46
COL3A1P02461 OR7E13P-201ENST00000526052 910 ntBASIC5.95□□□□□ -1.46
COL3A1P02461 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.95□□□□□ -1.46
COL3A1P02461 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.95□□□□□ -1.46
COL3A1P02461 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.95□□□□□ -1.46
COL3A1P02461 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.95□□□□□ -1.46
COL3A1P02461 LINC00557-201ENST00000563184 1279 ntBASIC5.95□□□□□ -1.46
COL3A1P02461 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.95□□□□□ -1.46
COL3A1P02461 KPNA2P3-201ENST00000584190 848 ntBASIC5.95□□□□□ -1.46
COL3A1P02461 RNF138P2-201ENST00000603490 592 ntBASIC5.95□□□□□ -1.46
COL3A1P02461 AC005034.4-201ENST00000603612 899 ntBASIC5.95□□□□□ -1.46
COL3A1P02461 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.95□□□□□ -1.46
COL3A1P02461 AC245389.2-201ENST00000616023 576 ntBASIC5.95□□□□□ -1.46
COL3A1P02461 AC242843.1-201ENST00000618702 573 ntBASIC5.95□□□□□ -1.46
COL3A1P02461 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.95□□□□□ -1.46
COL3A1P02461 AC079416.3-201ENST00000624479 549 ntBASIC5.95□□□□□ -1.46
COL3A1P02461 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.95□□□□□ -1.46
COL3A1P02461 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.95□□□□□ -1.46
COL3A1P02461 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
COL3A1P02461 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL3A1P02461 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.94□□□□□ -1.46
COL3A1P02461 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL3A1P02461 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.94□□□□□ -1.46
COL3A1P02461 EIF2AP4-201ENST00000424793 1781 ntBASIC5.94□□□□□ -1.46
COL3A1P02461 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
COL3A1P02461 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL3A1P02461 OR5P1P-201ENST00000299512 925 ntBASIC5.94□□□□□ -1.46
COL3A1P02461 SNORA70.2-201ENST00000364506 135 ntBASIC5.94□□□□□ -1.46
COL3A1P02461 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
COL3A1P02461 AC097374.1-203ENST00000400783 485 ntBASIC5.94□□□□□ -1.46
COL3A1P02461 MIR1271-201ENST00000408537 86 ntBASIC5.94□□□□□ -1.46
COL3A1P02461 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.94□□□□□ -1.46
COL3A1P02461 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.94□□□□□ -1.46
COL3A1P02461 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.94□□□□□ -1.46
COL3A1P02461 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL3A1P02461 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms