Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.29□□□□□ -1.72
TNFP01375 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.29□□□□□ -1.72
TNFP01375 STRADBP1-201ENST00000478954 1281 ntBASIC4.29□□□□□ -1.72
TNFP01375 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.29□□□□□ -1.72
TNFP01375 RPL35P6-201ENST00000490024 372 ntBASIC4.29□□□□□ -1.72
TNFP01375 AC010374.1-201ENST00000503762 1237 ntBASIC4.29□□□□□ -1.72
TNFP01375 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.29□□□□□ -1.72
TNFP01375 MTCO1P35-201ENST00000515270 228 ntBASIC4.29□□□□□ -1.72
TNFP01375 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.29□□□□□ -1.72
TNFP01375 AP003730.1-201ENST00000524605 285 ntBASIC4.29□□□□□ -1.72
TNFP01375 OR5BC1P-201ENST00000529327 739 ntBASIC4.29□□□□□ -1.72
TNFP01375 TVP23BP1-201ENST00000557500 617 ntBASIC4.29□□□□□ -1.72
TNFP01375 AC007224.1-201ENST00000564410 144 ntBASIC4.29□□□□□ -1.72
TNFP01375 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.29□□□□□ -1.72
TNFP01375 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.29□□□□□ -1.72
TNFP01375 AC233702.9-201ENST00000581528 203 ntBASIC4.29□□□□□ -1.72
TNFP01375 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TNFP01375 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.29□□□□□ -1.72
TNFP01375 AC068831.8-201ENST00000620171 435 ntBASIC4.29□□□□□ -1.72
TNFP01375 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TNFP01375 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.29□□□□□ -1.72
TNFP01375 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.29□□□□□ -1.72
TNFP01375 TMEM30CP-203ENST00000637814 1035 ntBASIC4.29□□□□□ -1.72
TNFP01375 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TNFP01375 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.29□□□□□ -1.72
TNFP01375 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TNFP01375 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TNFP01375 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
TNFP01375 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TNFP01375 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TNFP01375 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TNFP01375 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TNFP01375 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
TNFP01375 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TNFP01375 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TNFP01375 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TNFP01375 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TNFP01375 RPL6P29-201ENST00000414863 865 ntBASIC4.28□□□□□ -1.72
TNFP01375 EIF4A1P1-201ENST00000420241 934 ntBASIC4.28□□□□□ -1.72
TNFP01375 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.28□□□□□ -1.72
TNFP01375 EIF1P3-201ENST00000423841 334 ntBASIC4.28□□□□□ -1.72
TNFP01375 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.28□□□□□ -1.72
TNFP01375 AC114755.5-201ENST00000447760 831 ntBASIC4.28□□□□□ -1.72
TNFP01375 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TNFP01375 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TNFP01375 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.28□□□□□ -1.72
TNFP01375 RPL35AP15-201ENST00000468042 339 ntBASIC4.28□□□□□ -1.72
TNFP01375 AC112206.1-201ENST00000468416 477 ntBASIC4.28□□□□□ -1.72
TNFP01375 RPL23AP37-201ENST00000479658 549 ntBASIC4.28□□□□□ -1.72
TNFP01375 AL161747.1-201ENST00000480068 358 ntBASIC4.28□□□□□ -1.72
TNFP01375 AC041039.1-201ENST00000485656 536 ntBASIC4.28□□□□□ -1.72
TNFP01375 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.28□□□□□ -1.72
TNFP01375 AC108475.1-201ENST00000507880 950 ntBASIC4.28□□□□□ -1.72
TNFP01375 RNA5SP446-201ENST00000515955 82 ntBASIC4.28□□□□□ -1.72
TNFP01375 RN7SKP21-201ENST00000516503 220 ntBASIC4.28□□□□□ -1.72
TNFP01375 MIR2116-201ENST00000517221 80 ntBASIC4.28□□□□□ -1.72
TNFP01375 TRAV8-5-201ENST00000537369 341 ntBASIC4.28□□□□□ -1.72
TNFP01375 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.28□□□□□ -1.72
TNFP01375 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.28□□□□□ -1.72
TNFP01375 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.28□□□□□ -1.72
TNFP01375 AL020997.2-201ENST00000602607 184 ntBASIC4.28□□□□□ -1.72
TNFP01375 RNF138P2-201ENST00000603490 592 ntBASIC4.28□□□□□ -1.72
TNFP01375 AC097505.1-201ENST00000610199 565 ntBASIC4.28□□□□□ -1.72
TNFP01375 AL021997.2-201ENST00000615674 271 ntBASIC4.28□□□□□ -1.72
TNFP01375 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.28□□□□□ -1.72
TNFP01375 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.28□□□□□ -1.72
TNFP01375 AL672167.1-205ENST00000641112 3080 ntBASIC4.28□□□□□ -1.72
TNFP01375 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.28□□□□□ -1.72
TNFP01375 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.28□□□□□ -1.72
TNFP01375 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TNFP01375 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TNFP01375 HSPD1P14-201ENST00000432666 1618 ntBASIC4.28□□□□□ -1.72
TNFP01375 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TNFP01375 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.27□□□□□ -1.73
TNFP01375 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
TNFP01375 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
TNFP01375 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TNFP01375 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.27□□□□□ -1.73
TNFP01375 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TNFP01375 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TNFP01375 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.27□□□□□ -1.73
TNFP01375 MTCO1P46-201ENST00000451639 1491 ntBASIC4.27□□□□□ -1.73
TNFP01375 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TNFP01375 AL121657.1-201ENST00000327215 531 ntBASIC4.27□□□□□ -1.73
TNFP01375 RNA5SP307-201ENST00000362863 116 ntBASIC4.27□□□□□ -1.73
TNFP01375 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.27□□□□□ -1.73
TNFP01375 NRBF2P2-201ENST00000413087 861 ntBASIC4.27□□□□□ -1.73
TNFP01375 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.27□□□□□ -1.73
TNFP01375 AC007064.3-201ENST00000422608 359 ntBASIC4.27□□□□□ -1.73
TNFP01375 GTF2IP2-201ENST00000424290 697 ntBASIC4.27□□□□□ -1.73
TNFP01375 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.27□□□□□ -1.73
TNFP01375 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.27□□□□□ -1.73
TNFP01375 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.27□□□□□ -1.73
TNFP01375 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TNFP01375 RNA5SP103-201ENST00000459503 118 ntBASIC4.27□□□□□ -1.73
TNFP01375 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.27□□□□□ -1.73
TNFP01375 RPL7P19-201ENST00000469948 618 ntBASIC4.27□□□□□ -1.73
TNFP01375 AC108751.2-201ENST00000469993 231 ntBASIC4.27□□□□□ -1.73
TNFP01375 NPM1P29-201ENST00000483112 803 ntBASIC4.27□□□□□ -1.73
TNFP01375 AC108022.1-201ENST00000493466 478 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms