Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 RPS3AP41-201ENST00000462701 778 ntBASIC4.42□□□□□ -1.7
CLDN9O95484 AC021205.1-201ENST00000468797 348 ntBASIC4.42□□□□□ -1.7
CLDN9O95484 NIP7P2-201ENST00000485801 544 ntBASIC4.42□□□□□ -1.7
CLDN9O95484 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN9O95484 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN9O95484 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN9O95484 AC007016.1-201ENST00000512110 244 ntBASIC4.42□□□□□ -1.7
CLDN9O95484 HMGB1P19-201ENST00000517578 577 ntBASIC4.42□□□□□ -1.7
CLDN9O95484 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN9O95484 AP001922.4-201ENST00000526967 290 ntBASIC4.42□□□□□ -1.7
CLDN9O95484 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CLDN9O95484 NPM1P35-201ENST00000533043 868 ntBASIC4.42□□□□□ -1.7
CLDN9O95484 AC107918.3-201ENST00000533272 382 ntBASIC4.42□□□□□ -1.7
CLDN9O95484 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN9O95484 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN9O95484 UBE2FP2-201ENST00000566646 462 ntBASIC4.42□□□□□ -1.7
CLDN9O95484 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN9O95484 AC091042.1-201ENST00000579213 173 ntBASIC4.42□□□□□ -1.7
CLDN9O95484 MIR3934-201ENST00000579806 107 ntBASIC4.42□□□□□ -1.7
CLDN9O95484 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN9O95484 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN9O95484 AC116651.1-201ENST00000609724 556 ntBASIC4.42□□□□□ -1.7
CLDN9O95484 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN9O95484 AC007342.7-201ENST00000624610 2337 ntBASIC4.42□□□□□ -1.7
CLDN9O95484 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN9O95484 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN9O95484 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CLDN9O95484 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.42□□□□□ -1.7
CLDN9O95484 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN9O95484 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN9O95484 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
CLDN9O95484 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
CLDN9O95484 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CLDN9O95484 AL590240.1-201ENST00000334118 313 ntBASIC4.41□□□□□ -1.7
CLDN9O95484 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLDN9O95484 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLDN9O95484 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLDN9O95484 SDHCP2-201ENST00000398565 501 ntBASIC4.41□□□□□ -1.7
CLDN9O95484 AL139039.2-201ENST00000407436 479 ntBASIC4.41□□□□□ -1.7
CLDN9O95484 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.41□□□□□ -1.7
CLDN9O95484 AL358176.3-201ENST00000420757 454 ntBASIC4.41□□□□□ -1.7
CLDN9O95484 AC004448.2-201ENST00000422360 586 ntBASIC4.41□□□□□ -1.7
CLDN9O95484 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.41□□□□□ -1.7
CLDN9O95484 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.41□□□□□ -1.7
CLDN9O95484 AC008072.1-201ENST00000434254 824 ntBASIC4.41□□□□□ -1.7
CLDN9O95484 MTCYBP29-201ENST00000436327 1006 ntBASIC4.41□□□□□ -1.7
CLDN9O95484 ARL5AP3-201ENST00000439327 386 ntBASIC4.41□□□□□ -1.7
CLDN9O95484 TXNP2-201ENST00000443918 295 ntBASIC4.41□□□□□ -1.7
CLDN9O95484 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLDN9O95484 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.41□□□□□ -1.7
CLDN9O95484 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.41□□□□□ -1.7
CLDN9O95484 RPS3AP53-201ENST00000454716 778 ntBASIC4.41□□□□□ -1.7
CLDN9O95484 AC005008.1-201ENST00000456151 612 ntBASIC4.41□□□□□ -1.7
CLDN9O95484 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.41□□□□□ -1.7
CLDN9O95484 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.41□□□□□ -1.7
CLDN9O95484 AC012158.1-204ENST00000483430 465 ntBASIC4.41□□□□□ -1.7
CLDN9O95484 MTND3P6-201ENST00000485242 339 ntBASIC4.41□□□□□ -1.7
CLDN9O95484 IGLV2-34-201ENST00000490007 283 ntBASIC4.41□□□□□ -1.7
CLDN9O95484 AC231760.1-201ENST00000498002 260 ntBASIC4.41□□□□□ -1.7
CLDN9O95484 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.41□□□□□ -1.7
CLDN9O95484 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.41□□□□□ -1.7
CLDN9O95484 AC067904.2-201ENST00000517322 1283 ntBASIC4.41□□□□□ -1.7
CLDN9O95484 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.41□□□□□ -1.7
CLDN9O95484 BRD9P1-201ENST00000529855 560 ntBASIC4.41□□□□□ -1.7
CLDN9O95484 HIGD1AP5-201ENST00000529959 259 ntBASIC4.41□□□□□ -1.7
CLDN9O95484 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.41□□□□□ -1.7
CLDN9O95484 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.41□□□□□ -1.7
CLDN9O95484 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.41□□□□□ -1.7
CLDN9O95484 AC073091.2-201ENST00000603205 907 ntBASIC4.41□□□□□ -1.7
CLDN9O95484 MTCO2P22-201ENST00000603246 681 ntBASIC4.41□□□□□ -1.7
CLDN9O95484 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.41□□□□□ -1.7
CLDN9O95484 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLDN9O95484 KARSP3-201ENST00000571212 1504 ntBASIC4.41□□□□□ -1.7
CLDN9O95484 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLDN9O95484 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLDN9O95484 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.41□□□□□ -1.7
CLDN9O95484 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CLDN9O95484 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.4□□□□□ -1.7
CLDN9O95484 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
CLDN9O95484 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
CLDN9O95484 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.4□□□□□ -1.7
CLDN9O95484 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.4□□□□□ -1.7
CLDN9O95484 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CLDN9O95484 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CLDN9O95484 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CLDN9O95484 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CLDN9O95484 IL6STP1-201ENST00000346911 1020 ntBASIC4.4□□□□□ -1.71
CLDN9O95484 RNA5SP151-201ENST00000365632 117 ntBASIC4.4□□□□□ -1.71
CLDN9O95484 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CLDN9O95484 RNA5SP372-201ENST00000390836 115 ntBASIC4.4□□□□□ -1.71
CLDN9O95484 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.4□□□□□ -1.71
CLDN9O95484 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.4□□□□□ -1.71
CLDN9O95484 RAD23BP1-201ENST00000421404 1227 ntBASIC4.4□□□□□ -1.71
CLDN9O95484 AL590609.2-201ENST00000421430 368 ntBASIC4.4□□□□□ -1.71
CLDN9O95484 AC104837.2-201ENST00000427236 424 ntBASIC4.4□□□□□ -1.71
CLDN9O95484 UBE2V2P3-201ENST00000433562 437 ntBASIC4.4□□□□□ -1.71
CLDN9O95484 TPTE2P1-204ENST00000435256 593 ntBASIC4.4□□□□□ -1.71
CLDN9O95484 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.4□□□□□ -1.71
CLDN9O95484 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.4□□□□□ -1.71
CLDN9O95484 FHP1-201ENST00000442741 703 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms