Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RPL7P40-201ENST00000481703 745 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 RN7SL184P-201ENST00000488308 297 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 NDUFA5P12-201ENST00000503796 343 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 NDUFB5P1-201ENST00000508134 564 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 AC109464.1-201ENST00000511091 819 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 OR5BM1P-201ENST00000512021 366 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.42□□□□□ -1.54
VPS4BO75351 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS4BO75351 AC138832.1-201ENST00000522871 556 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS4BO75351 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS4BO75351 AC124293.1-201ENST00000530034 493 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS4BO75351 NBEAP1-201ENST00000554452 979 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 NMNAT1P5-201ENST00000559657 841 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 AC087465.1-201ENST00000560574 245 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS4BO75351 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS4BO75351 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS4BO75351 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS4BO75351 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS4BO75351 AP005136.1-201ENST00000579765 429 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS4BO75351 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS4BO75351 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS4BO75351 AC121247.2-201ENST00000604776 136 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 AL392112.1-201ENST00000605115 829 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 AC068620.4-201ENST00000636730 1182 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 U6.107-201ENST00000637108 79 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS4BO75351 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS4BO75351 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS4BO75351 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS4BO75351 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS4BO75351 AC000367.1-201ENST00000452711 1766 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
VPS4BO75351 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS4BO75351 AC010266.2-201ENST00000564741 3255 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS4BO75351 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
VPS4BO75351 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS4BO75351 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VPS4BO75351 AC138393.1-206ENST00000540997 1886 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS4BO75351 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS4BO75351 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS4BO75351 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS4BO75351 PWAR1-201ENST00000624188 2414 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS4BO75351 AL159987.1-201ENST00000347911 293 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 RNA5SP394-201ENST00000364216 119 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS4BO75351 AL133270.1-201ENST00000402635 279 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 AL034374.1-201ENST00000406329 351 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 MRPL53P1-201ENST00000414323 319 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 BMS1P17-202ENST00000416720 316 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.41□□□□□ -1.54
VPS4BO75351 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.41□□□□□ -1.54
VPS4BO75351 FTH1P16-201ENST00000435241 552 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS4BO75351 FGF7P5-201ENST00000441829 291 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.41□□□□□ -1.54
VPS4BO75351 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS4BO75351 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.41□□□□□ -1.54
VPS4BO75351 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS4BO75351 RN7SL329P-201ENST00000467740 299 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 RPL7P39-201ENST00000481157 744 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.41□□□□□ -1.54
VPS4BO75351 AC091435.1-201ENST00000505442 584 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 AC091912.1-201ENST00000511351 248 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 AC098976.1-201ENST00000513014 541 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 SNORA70.11-201ENST00000515987 138 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 SNORA70.13-201ENST00000516116 138 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 RNA5SP92-201ENST00000516437 110 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 SCARNA6.1-201ENST00000516989 238 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 SNORA43.3-201ENST00000517240 103 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 CDH12P4-201ENST00000517835 295 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 CDH12P3-201ENST00000517935 295 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 CDH12P1-201ENST00000518435 295 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 AP003461.1-201ENST00000528866 78 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 AC008083.2-201ENST00000546707 476 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.41□□□□□ -1.54
VPS4BO75351 MTCYBP33-201ENST00000575007 1130 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 MIR4666A-201ENST00000580160 79 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS4BO75351 MRPS35P3-201ENST00000603189 709 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 AC107075.1-201ENST00000613695 314 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 AC008115.3-201ENST00000614874 549 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS4BO75351 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
VPS4BO75351 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
VPS4BO75351 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS4BO75351 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS4BO75351 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS4BO75351 MTCO1P6-201ENST00000481192 1384 ntBASIC5.41□□□□□ -1.54
VPS4BO75351 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
VPS4BO75351 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS4BO75351 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
VPS4BO75351 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS4BO75351 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms