Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN3O15551 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN3O15551 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN3O15551 SNORA56-201ENST00000383966 129 ntBASIC4.99□□□□□ -1.61
CLDN3O15551 MIR129-1-201ENST00000384972 72 ntBASIC4.99□□□□□ -1.61
CLDN3O15551 SNORD96B-201ENST00000386148 79 ntBASIC4.99□□□□□ -1.61
CLDN3O15551 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CLDN3O15551 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.99□□□□□ -1.61
CLDN3O15551 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.99□□□□□ -1.61
CLDN3O15551 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.99□□□□□ -1.61
CLDN3O15551 RPL21P43-201ENST00000425440 472 ntBASIC4.99□□□□□ -1.61
CLDN3O15551 Z85994.2-201ENST00000434327 452 ntBASIC4.99□□□□□ -1.61
CLDN3O15551 CASP3P1-201ENST00000446037 609 ntBASIC4.99□□□□□ -1.61
CLDN3O15551 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN3O15551 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.99□□□□□ -1.61
CLDN3O15551 AC243772.1-201ENST00000451620 410 ntBASIC4.99□□□□□ -1.61
CLDN3O15551 AC006463.2-201ENST00000473326 348 ntBASIC4.99□□□□□ -1.61
CLDN3O15551 RPL23AP37-201ENST00000479658 549 ntBASIC4.99□□□□□ -1.61
CLDN3O15551 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN3O15551 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.99□□□□□ -1.61
CLDN3O15551 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.99□□□□□ -1.61
CLDN3O15551 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.99□□□□□ -1.61
CLDN3O15551 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN3O15551 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.99□□□□□ -1.61
CLDN3O15551 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.99□□□□□ -1.61
CLDN3O15551 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.99□□□□□ -1.61
CLDN3O15551 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN3O15551 AC084783.1-201ENST00000565846 910 ntBASIC4.99□□□□□ -1.61
CLDN3O15551 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN3O15551 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.99□□□□□ -1.61
CLDN3O15551 AC084373.1-201ENST00000603311 235 ntBASIC4.99□□□□□ -1.61
CLDN3O15551 COX6CP4-201ENST00000605798 228 ntBASIC4.99□□□□□ -1.61
CLDN3O15551 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.99□□□□□ -1.61
CLDN3O15551 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN3O15551 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CLDN3O15551 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN3O15551 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN3O15551 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN3O15551 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CLDN3O15551 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CLDN3O15551 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN3O15551 AL034374.1-201ENST00000406329 351 ntBASIC4.98□□□□□ -1.61
CLDN3O15551 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
CLDN3O15551 AC068287.1-201ENST00000430283 295 ntBASIC4.98□□□□□ -1.61
CLDN3O15551 RPL23AP93-201ENST00000440847 484 ntBASIC4.98□□□□□ -1.61
CLDN3O15551 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.98□□□□□ -1.61
CLDN3O15551 TPT1P13-201ENST00000449760 499 ntBASIC4.98□□□□□ -1.61
CLDN3O15551 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.98□□□□□ -1.61
CLDN3O15551 RPL10P17-201ENST00000453852 316 ntBASIC4.98□□□□□ -1.61
CLDN3O15551 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN3O15551 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN3O15551 snoU13.1-201ENST00000459157 104 ntBASIC4.98□□□□□ -1.61
CLDN3O15551 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN3O15551 RPS4XP18-201ENST00000495480 763 ntBASIC4.98□□□□□ -1.61
CLDN3O15551 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN3O15551 RNA5SP464-201ENST00000516251 108 ntBASIC4.98□□□□□ -1.61
CLDN3O15551 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN3O15551 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.98□□□□□ -1.61
CLDN3O15551 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.98□□□□□ -1.61
CLDN3O15551 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN3O15551 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.98□□□□□ -1.61
CLDN3O15551 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.98□□□□□ -1.61
CLDN3O15551 AP005119.2-201ENST00000579735 1105 ntBASIC4.98□□□□□ -1.61
CLDN3O15551 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.98□□□□□ -1.61
CLDN3O15551 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN3O15551 AC008745.1-201ENST00000604064 271 ntBASIC4.98□□□□□ -1.61
CLDN3O15551 AC097505.1-201ENST00000610199 565 ntBASIC4.98□□□□□ -1.61
CLDN3O15551 AC234782.5-201ENST00000617723 324 ntBASIC4.98□□□□□ -1.61
CLDN3O15551 AP005019.3-201ENST00000620418 560 ntBASIC4.98□□□□□ -1.61
CLDN3O15551 AC010435.1-201ENST00000623353 1177 ntBASIC4.98□□□□□ -1.61
CLDN3O15551 AC092159.4-201ENST00000624944 550 ntBASIC4.98□□□□□ -1.61
CLDN3O15551 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN3O15551 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN3O15551 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN3O15551 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN3O15551 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN3O15551 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CLDN3O15551 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN3O15551 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN3O15551 AC120338.1-201ENST00000625074 1541 ntBASIC4.97□□□□□ -1.61
CLDN3O15551 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN3O15551 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CLDN3O15551 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN3O15551 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN3O15551 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CLDN3O15551 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CLDN3O15551 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CLDN3O15551 ST13P16-201ENST00000401760 781 ntBASIC4.97□□□□□ -1.61
CLDN3O15551 OR13Z1P-201ENST00000416141 834 ntBASIC4.97□□□□□ -1.61
CLDN3O15551 RPEP3-201ENST00000425462 676 ntBASIC4.97□□□□□ -1.61
CLDN3O15551 RPS12P10-201ENST00000427031 377 ntBASIC4.97□□□□□ -1.61
CLDN3O15551 DNAJC19P7-201ENST00000428811 344 ntBASIC4.97□□□□□ -1.61
CLDN3O15551 CNOT7P1-201ENST00000429006 852 ntBASIC4.97□□□□□ -1.61
CLDN3O15551 NDUFA5P1-201ENST00000433858 341 ntBASIC4.97□□□□□ -1.61
CLDN3O15551 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.97□□□□□ -1.61
CLDN3O15551 TXNP2-201ENST00000443918 295 ntBASIC4.97□□□□□ -1.61
CLDN3O15551 RAD1P2-201ENST00000446414 663 ntBASIC4.97□□□□□ -1.61
CLDN3O15551 AP000942.1-201ENST00000463969 747 ntBASIC4.97□□□□□ -1.61
CLDN3O15551 AC021205.1-201ENST00000468797 348 ntBASIC4.97□□□□□ -1.61
CLDN3O15551 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms