Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 GTF2IP8-201ENST00000560687 584 ntBASIC7.63□□□□□ -1.19
CUX2O14529 MIR3651-201ENST00000630427 90 ntBASIC7.63□□□□□ -1.19
CUX2O14529 AC005831.1-201ENST00000624384 1697 ntBASIC7.63□□□□□ -1.19
CUX2O14529 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CUX2O14529 AP001157.1-201ENST00000550837 2339 ntBASIC7.63□□□□□ -1.19
CUX2O14529 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CUX2O14529 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CUX2O14529 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC7.63□□□□□ -1.19
CUX2O14529 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CUX2O14529 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CUX2O14529 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC7.62□□□□□ -1.19
CUX2O14529 AP000357.1-201ENST00000409926 1165 ntBASIC7.62□□□□□ -1.19
CUX2O14529 RPS26P28-201ENST00000470806 348 ntBASIC7.62□□□□□ -1.19
CUX2O14529 AC009120.7-201ENST00000623452 780 ntBASIC7.62□□□□□ -1.19
CUX2O14529 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CUX2O14529 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CUX2O14529 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CUX2O14529 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
CUX2O14529 RGS17P1-201ENST00000423358 553 ntBASIC7.62□□□□□ -1.19
CUX2O14529 RPL23AP43-201ENST00000446445 471 ntBASIC7.62□□□□□ -1.19
CUX2O14529 MRPL35P4-201ENST00000453682 566 ntBASIC7.62□□□□□ -1.19
CUX2O14529 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC7.62□□□□□ -1.19
CUX2O14529 AC115621.1-201ENST00000604653 858 ntBASIC7.62□□□□□ -1.19
CUX2O14529 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC7.62□□□□□ -1.19
CUX2O14529 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUX2O14529 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC7.61□□□□□ -1.19
CUX2O14529 CPHL1P-201ENST00000461341 3407 ntBASIC7.61□□□□□ -1.19
CUX2O14529 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CUX2O14529 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CUX2O14529 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CUX2O14529 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC7.61□□□□□ -1.19
CUX2O14529 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
CUX2O14529 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUX2O14529 SNORA5A-201ENST00000384111 134 ntBASIC7.61□□□□□ -1.19
CUX2O14529 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC7.61□□□□□ -1.19
CUX2O14529 APOA2-207ENST00000470459 416 ntTSL 5 BASIC7.61□□□□□ -1.19
CUX2O14529 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUX2O14529 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CUX2O14529 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC7.61□□□□□ -1.19
CUX2O14529 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.61□□□□□ -1.19
CUX2O14529 OR2L1P-202ENST00000641567 1023 ntBASIC7.61□□□□□ -1.19
CUX2O14529 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
CUX2O14529 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC7.6□□□□□ -1.19
CUX2O14529 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
CUX2O14529 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CUX2O14529 RNA5SP187-201ENST00000384400 119 ntBASIC7.6□□□□□ -1.19
CUX2O14529 VTI1BP4-201ENST00000427516 527 ntBASIC7.6□□□□□ -1.19
CUX2O14529 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC7.6□□□□□ -1.19
CUX2O14529 AC115115.1-201ENST00000449927 248 ntBASIC7.6□□□□□ -1.19
CUX2O14529 AC093166.2-201ENST00000455969 1017 ntBASIC7.6□□□□□ -1.19
CUX2O14529 ATP5G1P3-201ENST00000463301 410 ntBASIC7.6□□□□□ -1.19
CUX2O14529 MYL12BP2-201ENST00000503948 512 ntBASIC7.6□□□□□ -1.19
CUX2O14529 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC7.6□□□□□ -1.19
CUX2O14529 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CUX2O14529 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CUX2O14529 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
CUX2O14529 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC7.59□□□□□ -1.19
CUX2O14529 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CUX2O14529 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CUX2O14529 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
CUX2O14529 HSP90AA4P-202ENST00000506915 2228 ntBASIC7.59□□□□□ -1.19
CUX2O14529 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
CUX2O14529 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC7.59□□□□□ -1.19
CUX2O14529 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
CUX2O14529 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CUX2O14529 AL049781.1-201ENST00000623195 3585 ntBASIC7.59□□□□□ -1.19
CUX2O14529 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CUX2O14529 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC7.59□□□□□ -1.19
CUX2O14529 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC7.59□□□□□ -1.19
CUX2O14529 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CUX2O14529 AP000580.1-201ENST00000404439 358 ntBASIC7.59□□□□□ -1.19
CUX2O14529 AL157385.1-201ENST00000446973 268 ntBASIC7.59□□□□□ -1.19
CUX2O14529 AL451050.1-201ENST00000450126 415 ntBASIC7.59□□□□□ -1.19
CUX2O14529 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC7.59□□□□□ -1.19
CUX2O14529 PPP1R11P1-201ENST00000486095 376 ntBASIC7.59□□□□□ -1.19
CUX2O14529 AL049874.2-201ENST00000492636 288 ntBASIC7.59□□□□□ -1.19
CUX2O14529 RNA5SP49-201ENST00000516450 115 ntBASIC7.59□□□□□ -1.19
CUX2O14529 NELL2-211ENST00000548826 559 ntTSL 2 BASIC7.59□□□□□ -1.19
CUX2O14529 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC7.59□□□□□ -1.19
CUX2O14529 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC7.59□□□□□ -1.19
CUX2O14529 IGKV2OR2-2-201ENST00000605025 300 ntBASIC7.59□□□□□ -1.19
CUX2O14529 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC7.59□□□□□ -1.19
CUX2O14529 AC063923.1-201ENST00000478982 1619 ntBASIC7.59□□□□□ -1.19
CUX2O14529 AL133243.3-201ENST00000617415 3004 ntBASIC7.59□□□□□ -1.19
CUX2O14529 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.59□□□□□ -1.19
CUX2O14529 AC022417.1-201ENST00000624768 1303 ntBASIC7.59□□□□□ -1.2
CUX2O14529 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
CUX2O14529 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.58□□□□□ -1.2
CUX2O14529 DHX9P1-201ENST00000436565 3076 ntBASIC7.58□□□□□ -1.2
CUX2O14529 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
CUX2O14529 ZNF285B-201ENST00000561698 1767 ntBASIC7.58□□□□□ -1.2
CUX2O14529 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
CUX2O14529 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC7.58□□□□□ -1.2
CUX2O14529 HMGN2P31-201ENST00000432430 273 ntBASIC7.58□□□□□ -1.2
CUX2O14529 BTF3P6-201ENST00000448054 499 ntBASIC7.58□□□□□ -1.2
CUX2O14529 RN7SL429P-201ENST00000479090 223 ntBASIC7.58□□□□□ -1.2
CUX2O14529 RN7SL489P-201ENST00000486185 223 ntBASIC7.58□□□□□ -1.2
CUX2O14529 RN7SL327P-201ENST00000488659 223 ntBASIC7.58□□□□□ -1.2
CUX2O14529 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC7.58□□□□□ -1.2
CUX2O14529 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms