Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 ZNF603P-201ENST00000405613 487 ntBASIC3.68□□□□□ -1.82
TMEM235A6NFC5 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 SNRPFP1-201ENST00000414761 252 ntBASIC3.68□□□□□ -1.82
TMEM235A6NFC5 AL161631.1-201ENST00000417933 486 ntBASIC3.68□□□□□ -1.82
TMEM235A6NFC5 AC079355.1-201ENST00000421770 223 ntBASIC3.68□□□□□ -1.82
TMEM235A6NFC5 YWHAEP5-201ENST00000431545 765 ntBASIC3.68□□□□□ -1.82
TMEM235A6NFC5 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 RPL35AP15-201ENST00000468042 339 ntBASIC3.68□□□□□ -1.82
TMEM235A6NFC5 AC006517.1-201ENST00000480485 328 ntBASIC3.68□□□□□ -1.82
TMEM235A6NFC5 SYT14P1-201ENST00000481459 721 ntBASIC3.68□□□□□ -1.82
TMEM235A6NFC5 ATP1B1P1-201ENST00000509767 915 ntBASIC3.68□□□□□ -1.82
TMEM235A6NFC5 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 OR5AZ1P-201ENST00000527448 943 ntBASIC3.68□□□□□ -1.82
TMEM235A6NFC5 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 AC010547.7-201ENST00000570323 333 ntBASIC3.68□□□□□ -1.82
TMEM235A6NFC5 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 AC025946.2-201ENST00000603398 234 ntBASIC3.68□□□□□ -1.82
TMEM235A6NFC5 AL359715.5-201ENST00000623431 443 ntBASIC3.68□□□□□ -1.82
TMEM235A6NFC5 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 FP325313.1-201ENST00000638228 703 ntBASIC3.68□□□□□ -1.82
TMEM235A6NFC5 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TMEM235A6NFC5 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 GLULP6-201ENST00000399502 913 ntBASIC3.67□□□□□ -1.82
TMEM235A6NFC5 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 AC092647.1-201ENST00000420654 287 ntBASIC3.67□□□□□ -1.82
TMEM235A6NFC5 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 AC114495.1-201ENST00000441274 436 ntBASIC3.67□□□□□ -1.82
TMEM235A6NFC5 HMGB1P16-201ENST00000447155 540 ntBASIC3.67□□□□□ -1.82
TMEM235A6NFC5 AC026348.1-201ENST00000462549 1053 ntBASIC3.67□□□□□ -1.82
TMEM235A6NFC5 RPL7P22-201ENST00000466005 733 ntBASIC3.67□□□□□ -1.82
TMEM235A6NFC5 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 RPL7P16-201ENST00000479738 738 ntBASIC3.67□□□□□ -1.82
TMEM235A6NFC5 RN7SL727P-201ENST00000482164 296 ntBASIC3.67□□□□□ -1.82
TMEM235A6NFC5 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 EDDM3DP-201ENST00000554692 434 ntBASIC3.67□□□□□ -1.82
TMEM235A6NFC5 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 AL031320.1-201ENST00000604177 357 ntBASIC3.67□□□□□ -1.82
TMEM235A6NFC5 AC078899.5-201ENST00000612475 178 ntBASIC3.67□□□□□ -1.82
TMEM235A6NFC5 AC022467.1-201ENST00000614738 749 ntBASIC3.67□□□□□ -1.82
TMEM235A6NFC5 MIR4727-201ENST00000622232 55 ntBASIC3.67□□□□□ -1.82
TMEM235A6NFC5 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 AC006971.1-201ENST00000407916 4486 ntBASIC3.67□□□□□ -1.82
TMEM235A6NFC5 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 AL929601.4-201ENST00000613011 1341 ntBASIC3.67□□□□□ -1.82
TMEM235A6NFC5 AC125257.1-201ENST00000560400 2930 ntBASIC3.67□□□□□ -1.82
TMEM235A6NFC5 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TMEM235A6NFC5 C4BPAP1-201ENST00000415474 1893 ntBASIC3.67□□□□□ -1.82
TMEM235A6NFC5 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
TMEM235A6NFC5 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TMEM235A6NFC5 AC083899.2-201ENST00000423285 1376 ntBASIC3.66□□□□□ -1.82
TMEM235A6NFC5 CDC27P2-201ENST00000425026 1922 ntBASIC3.66□□□□□ -1.82
TMEM235A6NFC5 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TMEM235A6NFC5 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.66□□□□□ -1.82
TMEM235A6NFC5 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TMEM235A6NFC5 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TMEM235A6NFC5 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TMEM235A6NFC5 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TMEM235A6NFC5 AC010132.2-201ENST00000295493 1043 ntBASIC3.66□□□□□ -1.82
TMEM235A6NFC5 SNORA51.8-201ENST00000384234 132 ntBASIC3.66□□□□□ -1.82
TMEM235A6NFC5 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.66□□□□□ -1.82
TMEM235A6NFC5 AC097374.1-203ENST00000400783 485 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms