Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AL133268.1-201ENST00000405676 1401 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 RNU6-353P-201ENST00000364266 108 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 RN7SKP153-201ENST00000365026 316 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 RNU4-22P-201ENST00000411058 166 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 RPS7P9-201ENST00000414704 586 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 RPS27AP6-201ENST00000427962 448 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 Z80107.2-201ENST00000445127 392 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 RN7SL189P-201ENST00000468631 289 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 RN7SL244P-201ENST00000493405 297 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AC023050.1-201ENST00000498198 304 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 PRELID3BP5-201ENST00000508612 460 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AC006427.1-201ENST00000514359 712 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 IGKV2D-10-201ENST00000520194 281 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 OR5AZ1P-201ENST00000527448 943 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 BRD9P1-201ENST00000529855 560 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AC122134.1-201ENST00000565664 1104 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AC022884.3-201ENST00000579571 248 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 MIR4480-201ENST00000582492 71 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 MIR7853-201ENST00000584820 132 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AC125494.3-201ENST00000602759 455 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AC022022.2-201ENST00000602989 360 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AC108738.1-201ENST00000603703 237 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AC005084.1-201ENST00000605160 304 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AC024595.1-201ENST00000623088 387 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AC073869.7-201ENST00000640874 297 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 INTS6P1-201ENST00000504674 2530 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AC006206.1-201ENST00000544842 3387 ntBASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AC112198.2-201ENST00000426589 6996 ntBASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 CASC19-221ENST00000641309 1382 ntBASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 AC073055.1-201ENST00000456901 1621 ntBASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 SNORA62.2-201ENST00000364672 152 ntBASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 AL021331.1-201ENST00000402817 582 ntBASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 RN7SKP199-201ENST00000410325 305 ntBASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 HIGD1AP15-201ENST00000416198 280 ntBASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 TAF13P2-201ENST00000416876 286 ntBASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 DDX39BP1-205ENST00000422507 192 ntBASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 AC124944.2-201ENST00000429866 1242 ntBASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 RPL31P44-201ENST00000447680 377 ntBASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 ZNF886P-201ENST00000450781 723 ntBASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 CDC42P1-201ENST00000456658 548 ntBASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 AC083982.1-201ENST00000485679 344 ntBASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 AC079203.1-201ENST00000487972 404 ntBASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 PRELID3BP4-201ENST00000515476 571 ntBASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.17□□□□□ -1.58
TBC1D3FA6NER0 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms