Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 RBPJP2-201ENST00000618187 1444 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 Y_RNA.194-201ENST00000363985 102 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 RN7SKP292-201ENST00000365522 317 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AC007435.1-201ENST00000421086 415 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 OR6K4P-201ENST00000423179 955 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 HMGB3P10-201ENST00000434734 572 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 HMGB1P45-201ENST00000435986 653 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AC129850.1-201ENST00000436203 508 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 ARAFP2-201ENST00000440565 559 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 RPS26P30-201ENST00000443431 335 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AL360221.1-201ENST00000445989 335 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 RN7SL254P-201ENST00000460609 284 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AC105384.2-201ENST00000508433 640 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AC018797.1-201ENST00000510791 255 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AC008837.2-201ENST00000513076 418 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AC105185.1-201ENST00000518705 535 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AC090022.1-201ENST00000546569 311 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AC008083.2-201ENST00000546707 476 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 NIFKP8-201ENST00000560500 874 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 ACTR3BP3-201ENST00000565577 979 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 ISCA1P3-201ENST00000577104 373 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 MIR548Y-201ENST00000582739 110 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 VN1R82P-201ENST00000601481 356 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AC068768.2-201ENST00000602352 343 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 CLPTM1LP1-201ENST00000604519 484 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AP005137.2-201ENST00000609238 400 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AL133243.1-201ENST00000614487 366 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 FP325313.1-201ENST00000638228 703 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AL022322.2-201ENST00000624072 20397 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 AP004607.3-201ENST00000530354 3915 ntBASIC6.11□□□□□ -1.43
CCDC66A2RUB6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC66A2RUB6 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC66A2RUB6 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
CCDC66A2RUB6 AC133552.1-201ENST00000569988 4007 ntBASIC6.1□□□□□ -1.43
CCDC66A2RUB6 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC66A2RUB6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
CCDC66A2RUB6 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
CCDC66A2RUB6 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC66A2RUB6 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC66A2RUB6 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CCDC66A2RUB6 AL390237.1-201ENST00000404226 1415 ntBASIC6.1□□□□□ -1.43
CCDC66A2RUB6 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC66A2RUB6 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
CCDC66A2RUB6 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC66A2RUB6 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC66A2RUB6 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CCDC66A2RUB6 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC66A2RUB6 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CCDC66A2RUB6 RNU1-136P-201ENST00000384181 164 ntBASIC6.1□□□□□ -1.43
CCDC66A2RUB6 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC66A2RUB6 AC016739.1-201ENST00000405359 345 ntBASIC6.1□□□□□ -1.43
CCDC66A2RUB6 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC66A2RUB6 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC66A2RUB6 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC66A2RUB6 GTF2IP23-201ENST00000423746 351 ntBASIC6.1□□□□□ -1.43
CCDC66A2RUB6 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC66A2RUB6 USP9YP31-201ENST00000431405 881 ntBASIC6.1□□□□□ -1.43
CCDC66A2RUB6 AL353662.1-201ENST00000439099 327 ntBASIC6.1□□□□□ -1.43
CCDC66A2RUB6 AC009263.1-201ENST00000441193 1239 ntBASIC6.1□□□□□ -1.43
CCDC66A2RUB6 AC079776.3-201ENST00000450665 370 ntBASIC6.1□□□□□ -1.43
CCDC66A2RUB6 HMGB1P7-201ENST00000450921 612 ntBASIC6.1□□□□□ -1.43
CCDC66A2RUB6 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC66A2RUB6 RPL30P6-201ENST00000475925 342 ntBASIC6.1□□□□□ -1.43
CCDC66A2RUB6 AC073358.1-201ENST00000505671 684 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms