Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AL672167.1-204ENST00000641875 3017 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AL022393.1-201ENST00000625142 1677 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 ECM1P2-201ENST00000503354 1577 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 SNORA73.1-201ENST00000363107 205 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 Y_RNA.169-201ENST00000363745 96 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 SNORA66-201ENST00000384792 133 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 CHMP1B2P-201ENST00000399581 597 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 TMBIM7P-201ENST00000418074 855 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AC023128.2-201ENST00000420880 1223 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AC090960.1-201ENST00000421072 306 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AC006065.1-201ENST00000422539 802 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AL035458.1-201ENST00000433096 585 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 HSFY3P-201ENST00000444242 1191 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 HMGB3P6-201ENST00000444896 598 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AC000111.2-201ENST00000448200 210 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 RN7SL517P-201ENST00000462240 305 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AC004815.1-201ENST00000484185 331 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AC023050.1-201ENST00000498198 304 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AC025459.1-201ENST00000504072 156 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 MRPS33P2-201ENST00000507850 322 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AL356057.1-201ENST00000533798 831 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 DUXAP6-201ENST00000553858 601 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 NMNAT1P1-201ENST00000554095 876 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AL109653.1-201ENST00000603091 248 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 MEMO1P5-201ENST00000604810 406 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AC067838.1-201ENST00000606064 577 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AC245008.1-201ENST00000608123 476 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AC009318.3-201ENST00000616916 503 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AL121895.2-201ENST00000619558 447 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 RPL23AP61-201ENST00000623642 466 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 NCOA4P2-201ENST00000340589 1813 ntBASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.22□□□□□ -1.57
TCRBV5S1A1TA0A578 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.21□□□□□ -1.57
TCRBV5S1A1TA0A578 AL078595.2-201ENST00000605309 1780 ntBASIC5.21□□□□□ -1.57
TCRBV5S1A1TA0A578 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
TCRBV5S1A1TA0A578 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
TCRBV5S1A1TA0A578 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 RNU4-51P-201ENST00000364206 140 ntBASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 U3.23-201ENST00000391132 200 ntBASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 AC005522.1-201ENST00000395416 346 ntBASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 AL078599.1-201ENST00000402075 293 ntBASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 HNRNPDP2-201ENST00000406475 478 ntBASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 CTSL3P-202ENST00000412179 788 ntBASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 VN1R108P-201ENST00000431580 830 ntBASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 AC012512.1-201ENST00000446594 718 ntBASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 OTX2P1-201ENST00000450956 354 ntBASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 RPS20P4-201ENST00000461659 355 ntBASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.21□□□□□ -1.58
TCRBV5S1A1TA0A578 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms