Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 HSPA8P14-201ENST00000552265 1805 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AL049737.1-201ENST00000413920 1403 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 SGO1P2-201ENST00000429458 1589 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 AL118496.1-201ENST00000440201 1812 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 RNA5SP453-201ENST00000362503 119 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 RNA5SP394-201ENST00000364216 119 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 RNU6-1300P-201ENST00000391046 108 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 HMGB1P20-201ENST00000402555 677 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 Z93242.1-201ENST00000427102 353 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 RPS3AP38-201ENST00000435889 763 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 AL354941.1-201ENST00000438600 464 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 TXNP5-201ENST00000441043 315 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 MTND5P2-201ENST00000442927 1142 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 AC073909.1-201ENST00000447112 999 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 AC104306.1-201ENST00000449702 371 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 AC104164.1-201ENST00000460282 590 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 RPS27AP18-201ENST00000515536 459 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 AC105185.1-201ENST00000518705 535 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 AC004217.3-201ENST00000551552 878 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 OR4K7P-201ENST00000580232 945 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 PSMA6P4-201ENST00000603247 718 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 AL592221.1-201ENST00000605266 382 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 AC145423.1-201ENST00000605712 336 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 CR392039.4-201ENST00000624968 501 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 TRIM51GP-201ENST00000534741 1350 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 AC027228.2-201ENST00000567141 2154 ntBASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHGA3Q9Y5H0 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 MIR217-201ENST00000384817 110 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 MIR1178-201ENST00000408396 91 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 BX276092.6-201ENST00000430476 250 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AC090018.1-201ENST00000434369 367 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AC092013.1-201ENST00000438795 332 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AC092647.3-201ENST00000443044 633 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 BX276092.8-201ENST00000455722 250 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms