Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC010487.1-201ENST00000594408 1172 ntBASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 TATDN2P3-201ENST00000452855 3665 ntBASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 AC079949.2-201ENST00000617117 2933 ntBASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 AL136984.1-201ENST00000607611 1893 ntBASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 AP003175.1-201ENST00000641383 6658 ntBASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 ZNF733P-202ENST00000444809 1573 ntBASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 AC107980.1-201ENST00000558671 3355 ntBASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.8□□□□□ -1.16
ZC3H4Q9UPT8 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 RNA5SP346-201ENST00000363541 121 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 RN7SKP160-201ENST00000363804 340 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 RNU6-1227P-201ENST00000383981 107 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AL589647.1-201ENST00000402485 466 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 RPS3AP2-201ENST00000407190 754 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 BX295541.1-201ENST00000417774 250 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AC114814.2-201ENST00000419195 485 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 BX284632.2-201ENST00000421091 399 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AL035660.1-201ENST00000422041 222 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 NPM1P22-201ENST00000427761 952 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 FCF1P1-201ENST00000432690 571 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 FABP5P2-201ENST00000439042 408 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AC022364.2-201ENST00000457963 554 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AC026254.2-201ENST00000475295 371 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 MTND6P8-201ENST00000503471 522 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AC114981.1-201ENST00000503897 678 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AC112191.2-201ENST00000522428 333 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AP000648.1-201ENST00000529682 397 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 OR5AN2P-201ENST00000534535 896 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AC012182.1-201ENST00000570133 895 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 MIR5697-201ENST00000578045 78 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 MIR3671-201ENST00000580455 88 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 NRBF2P5-201ENST00000603087 788 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 PRELID3BP8-201ENST00000604148 295 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AL139286.1-201ENST00000604465 483 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AC006924.1-201ENST00000610750 559 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AC110994.2-201ENST00000635481 492 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 MIR1321-201ENST00000637766 79 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 CDR1-202ENST00000625883 1485 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 SPATA31C2-201ENST00000324915 3777 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 HSPA8P17-201ENST00000427029 1382 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 AC008627.1-201ENST00000517511 1704 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms