Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 U3.30-201ENST00000391308 210 ntBASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 AL356967.1-201ENST00000406305 431 ntBASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 AL590806.1-201ENST00000415818 853 ntBASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 MTCO3P21-201ENST00000430791 643 ntBASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 AL157884.3-201ENST00000448273 1184 ntBASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 CEACAMP6-201ENST00000452007 574 ntBASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 IFNWP4-201ENST00000453148 294 ntBASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 RPS5P7-201ENST00000456664 608 ntBASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 RPS23P7-201ENST00000466210 444 ntBASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 SEC11B-201ENST00000518383 499 ntBASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 SMARCE1P4-201ENST00000523647 241 ntBASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 OR5M2P-201ENST00000529003 936 ntBASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 AC009643.1-201ENST00000532030 391 ntBASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 AC020915.5-201ENST00000596836 964 ntBASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 PSMA6P4-201ENST00000603247 718 ntBASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 AC090953.1-201ENST00000604305 1092 ntBASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 AC010200.2-201ENST00000605098 235 ntBASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 KARSP3-201ENST00000571212 1504 ntBASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 CYP1D1P-201ENST00000416662 1433 ntBASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 AC126323.6-202ENST00000568092 3511 ntBASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 OR4K15-201ENST00000305051 1216 ntBASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 AL357515.1-201ENST00000402967 542 ntBASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 RPS27AP7-201ENST00000422792 455 ntBASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 AL121578.1-201ENST00000428051 892 ntBASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 AC016831.4-201ENST00000438302 307 ntBASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 RPL7AP61-201ENST00000443410 636 ntBASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 AL691482.1-201ENST00000453255 87 ntBASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 RNU6-1218P-201ENST00000458990 108 ntBASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 AC026979.1-201ENST00000492525 396 ntBASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 SCARNA22-201ENST00000503991 125 ntBASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 AGGF1P9-201ENST00000561884 913 ntBASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 AL596275.2-204ENST00000641628 552 ntBASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 AL596275.2-206ENST00000641957 626 ntBASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 SPATA2P1-201ENST00000431223 2055 ntBASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 AC120338.1-201ENST00000625074 1541 ntBASIC4.82□□□□□ -1.64
TM9SF3Q9HD45 AC074029.4-201ENST00000624796 1859 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AC068538.1-201ENST00000376856 336 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 SNORA70F-201ENST00000384142 135 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AL049697.2-201ENST00000403708 294 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AC048351.1-201ENST00000420064 602 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 GEMIN8P3-201ENST00000445417 720 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AC000111.2-201ENST00000448200 210 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AC104629.2-201ENST00000468627 598 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 OR52A4P-201ENST00000472867 958 ntBASIC4.81□□□□□ -1.64
TM9SF3Q9HD45 AC068587.1-201ENST00000483613 781 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms