Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 HMGB1P51-201ENST00000605166 638 ntBASIC5.95□□□□□ -1.46
CD248Q9HCU0 AC145423.1-201ENST00000605712 336 ntBASIC5.95□□□□□ -1.46
CD248Q9HCU0 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.95□□□□□ -1.46
CD248Q9HCU0 AC122133.1-201ENST00000613964 233 ntBASIC5.95□□□□□ -1.46
CD248Q9HCU0 AC007204.2-201ENST00000615022 616 ntBASIC5.95□□□□□ -1.46
CD248Q9HCU0 AC124312.6-202ENST00000623624 418 ntBASIC5.95□□□□□ -1.46
CD248Q9HCU0 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.95□□□□□ -1.46
CD248Q9HCU0 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.95□□□□□ -1.46
CD248Q9HCU0 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
CD248Q9HCU0 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CD248Q9HCU0 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CD248Q9HCU0 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
CD248Q9HCU0 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CD248Q9HCU0 AC011933.2-201ENST00000578539 2790 ntBASIC5.95□□□□□ -1.46
CD248Q9HCU0 AC239868.2-201ENST00000564237 4527 ntBASIC5.95□□□□□ -1.46
CD248Q9HCU0 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.94□□□□□ -1.46
CD248Q9HCU0 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CD248Q9HCU0 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 MTND4P29-201ENST00000503122 1372 ntBASIC5.94□□□□□ -1.46
CD248Q9HCU0 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CD248Q9HCU0 FAM133CP-201ENST00000332869 704 ntBASIC5.94□□□□□ -1.46
CD248Q9HCU0 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
CD248Q9HCU0 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CD248Q9HCU0 Y_RNA.472-201ENST00000384322 102 ntBASIC5.94□□□□□ -1.46
CD248Q9HCU0 RNU6-83P-201ENST00000384568 112 ntBASIC5.94□□□□□ -1.46
CD248Q9HCU0 AL445183.3-201ENST00000414168 502 ntBASIC5.94□□□□□ -1.46
CD248Q9HCU0 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.94□□□□□ -1.46
CD248Q9HCU0 MTND4P3-201ENST00000417829 541 ntBASIC5.94□□□□□ -1.46
CD248Q9HCU0 ARAFP1-201ENST00000422172 605 ntBASIC5.94□□□□□ -1.46
CD248Q9HCU0 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 AC099677.3-201ENST00000427081 395 ntBASIC5.94□□□□□ -1.46
CD248Q9HCU0 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.94□□□□□ -1.46
CD248Q9HCU0 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.94□□□□□ -1.46
CD248Q9HCU0 AL357520.1-201ENST00000441557 453 ntBASIC5.94□□□□□ -1.46
CD248Q9HCU0 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.94□□□□□ -1.46
CD248Q9HCU0 AL133244.1-201ENST00000456007 258 ntBASIC5.94□□□□□ -1.46
CD248Q9HCU0 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
CD248Q9HCU0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.94□□□□□ -1.46
CD248Q9HCU0 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.94□□□□□ -1.46
CD248Q9HCU0 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.94□□□□□ -1.46
CD248Q9HCU0 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.94□□□□□ -1.46
CD248Q9HCU0 AC090695.1-201ENST00000561269 1222 ntBASIC5.94□□□□□ -1.46
CD248Q9HCU0 AC104229.1-201ENST00000561364 255 ntBASIC5.94□□□□□ -1.46
CD248Q9HCU0 SULT1C2P2-201ENST00000562517 294 ntBASIC5.94□□□□□ -1.46
CD248Q9HCU0 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.94□□□□□ -1.46
CD248Q9HCU0 AL356055.1-201ENST00000602528 446 ntBASIC5.94□□□□□ -1.46
CD248Q9HCU0 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.94□□□□□ -1.46
CD248Q9HCU0 AC024941.1-201ENST00000612250 334 ntBASIC5.94□□□□□ -1.46
CD248Q9HCU0 AC024257.5-201ENST00000612739 531 ntBASIC5.94□□□□□ -1.46
CD248Q9HCU0 AC015712.7-201ENST00000615211 635 ntBASIC5.94□□□□□ -1.46
CD248Q9HCU0 AL158063.1-201ENST00000615349 536 ntBASIC5.94□□□□□ -1.46
CD248Q9HCU0 MIR6719-201ENST00000622428 87 ntBASIC5.94□□□□□ -1.46
CD248Q9HCU0 OR11H2-202ENST00000641517 1085 ntBASIC5.94□□□□□ -1.46
CD248Q9HCU0 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
CD248Q9HCU0 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.94□□□□□ -1.46
CD248Q9HCU0 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
CD248Q9HCU0 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.94□□□□□ -1.46
CD248Q9HCU0 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CD248Q9HCU0 THAP12P5-201ENST00000405864 2275 ntBASIC5.94□□□□□ -1.46
CD248Q9HCU0 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CD248Q9HCU0 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CD248Q9HCU0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CD248Q9HCU0 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CD248Q9HCU0 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CD248Q9HCU0 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CD248Q9HCU0 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CD248Q9HCU0 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CD248Q9HCU0 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
CD248Q9HCU0 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CD248Q9HCU0 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
CD248Q9HCU0 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CD248Q9HCU0 RNU6-1283P-201ENST00000365314 105 ntBASIC5.93□□□□□ -1.46
CD248Q9HCU0 RNY3P14-201ENST00000384309 102 ntBASIC5.93□□□□□ -1.46
CD248Q9HCU0 Y_RNA.517-201ENST00000384551 106 ntBASIC5.93□□□□□ -1.46
CD248Q9HCU0 RPS3AP24-201ENST00000407896 734 ntBASIC5.93□□□□□ -1.46
CD248Q9HCU0 RNA5SP296-201ENST00000410523 111 ntBASIC5.93□□□□□ -1.46
CD248Q9HCU0 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.93□□□□□ -1.46
CD248Q9HCU0 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.93□□□□□ -1.46
CD248Q9HCU0 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.93□□□□□ -1.46
CD248Q9HCU0 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.93□□□□□ -1.46
CD248Q9HCU0 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms