Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC079880.2-201ENST00000603790 1213 ntBASIC4.16□□□□□ -1.74
CHD8Q9HCK8 ELOCP35-201ENST00000604289 336 ntBASIC4.16□□□□□ -1.74
CHD8Q9HCK8 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 AC130448.2-201ENST00000624082 374 ntBASIC4.16□□□□□ -1.74
CHD8Q9HCK8 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 AC007382.1-201ENST00000624376 2618 ntBASIC4.16□□□□□ -1.74
CHD8Q9HCK8 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHD8Q9HCK8 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CHD8Q9HCK8 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
CHD8Q9HCK8 RN7SKP156-201ENST00000410308 342 ntBASIC4.15□□□□□ -1.74
CHD8Q9HCK8 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.15□□□□□ -1.74
CHD8Q9HCK8 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.15□□□□□ -1.74
CHD8Q9HCK8 AC090804.1-201ENST00000448870 490 ntBASIC4.15□□□□□ -1.74
CHD8Q9HCK8 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.15□□□□□ -1.74
CHD8Q9HCK8 AC104763.1-201ENST00000475274 360 ntBASIC4.15□□□□□ -1.74
CHD8Q9HCK8 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.15□□□□□ -1.74
CHD8Q9HCK8 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.15□□□□□ -1.74
CHD8Q9HCK8 AL445363.3-201ENST00000623080 671 ntBASIC4.15□□□□□ -1.74
CHD8Q9HCK8 AC010608.2-201ENST00000624830 470 ntBASIC4.15□□□□□ -1.74
CHD8Q9HCK8 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CHD8Q9HCK8 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CHD8Q9HCK8 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CHD8Q9HCK8 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CHD8Q9HCK8 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.15□□□□□ -1.74
CHD8Q9HCK8 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CHD8Q9HCK8 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.15□□□□□ -1.74
CHD8Q9HCK8 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.15□□□□□ -1.74
CHD8Q9HCK8 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHD8Q9HCK8 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.15□□□□□ -1.75
CHD8Q9HCK8 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CHD8Q9HCK8 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHD8Q9HCK8 STK3-216ENST00000523601 3107 ntTSL 2 BASIC4.15□□□□□ -1.75
CHD8Q9HCK8 SNORA3C-201ENST00000408792 125 ntBASIC4.15□□□□□ -1.75
CHD8Q9HCK8 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.15□□□□□ -1.75
CHD8Q9HCK8 AC132942.1-201ENST00000486753 483 ntBASIC4.15□□□□□ -1.75
CHD8Q9HCK8 IMPA1P1-201ENST00000510718 842 ntBASIC4.15□□□□□ -1.75
CHD8Q9HCK8 IFITM8P-201ENST00000522529 394 ntBASIC4.15□□□□□ -1.75
CHD8Q9HCK8 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.15□□□□□ -1.75
CHD8Q9HCK8 AC060780.2-201ENST00000589047 198 ntBASIC4.15□□□□□ -1.75
CHD8Q9HCK8 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC4.15□□□□□ -1.75
CHD8Q9HCK8 AL137843.1-201ENST00000605078 385 ntBASIC4.15□□□□□ -1.75
CHD8Q9HCK8 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHD8Q9HCK8 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHD8Q9HCK8 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHD8Q9HCK8 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CHD8Q9HCK8 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
CHD8Q9HCK8 AC083899.1-201ENST00000454465 3819 ntBASIC4.15□□□□□ -1.75
CHD8Q9HCK8 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHD8Q9HCK8 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHD8Q9HCK8 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHD8Q9HCK8 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.15□□□□□ -1.75
CHD8Q9HCK8 AC009643.2-201ENST00000603543 1448 ntBASIC4.15□□□□□ -1.75
CHD8Q9HCK8 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC4.15□□□□□ -1.75
CHD8Q9HCK8 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CHD8Q9HCK8 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CHD8Q9HCK8 AC083843.3-201ENST00000623679 2186 ntBASIC4.14□□□□□ -1.75
CHD8Q9HCK8 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.14□□□□□ -1.75
CHD8Q9HCK8 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 TBCAP1-201ENST00000436520 327 ntBASIC4.14□□□□□ -1.75
CHD8Q9HCK8 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 HSPD1P15-201ENST00000505573 1122 ntBASIC4.14□□□□□ -1.75
CHD8Q9HCK8 AC093755.1-201ENST00000512950 1023 ntBASIC4.14□□□□□ -1.75
CHD8Q9HCK8 AC011816.2-201ENST00000607089 556 ntBASIC4.14□□□□□ -1.75
CHD8Q9HCK8 AC055839.1-201ENST00000634467 498 ntBASIC4.14□□□□□ -1.75
CHD8Q9HCK8 AL512643.1-201ENST00000635735 524 ntBASIC4.14□□□□□ -1.75
CHD8Q9HCK8 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 AL391684.1-202ENST00000641293 1636 ntBASIC4.14□□□□□ -1.75
CHD8Q9HCK8 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 RPL7P44-201ENST00000424827 742 ntBASIC4.14□□□□□ -1.75
CHD8Q9HCK8 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 RPL21P11-201ENST00000461458 483 ntBASIC4.14□□□□□ -1.75
CHD8Q9HCK8 RPS4XP12-201ENST00000461747 709 ntBASIC4.14□□□□□ -1.75
CHD8Q9HCK8 PSAT1P4-201ENST00000466500 526 ntBASIC4.14□□□□□ -1.75
CHD8Q9HCK8 RN7SL293P-201ENST00000481765 281 ntBASIC4.14□□□□□ -1.75
CHD8Q9HCK8 RPL7P23-201ENST00000493874 747 ntBASIC4.14□□□□□ -1.75
CHD8Q9HCK8 IGBP1P4-201ENST00000503202 879 ntBASIC4.14□□□□□ -1.75
CHD8Q9HCK8 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 RPL21P7-201ENST00000557463 483 ntBASIC4.14□□□□□ -1.75
CHD8Q9HCK8 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.14□□□□□ -1.75
CHD8Q9HCK8 AL513548.1-201ENST00000562904 1724 ntBASIC4.14□□□□□ -1.75
CHD8Q9HCK8 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms