Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC015908.5-201ENST00000623289 343 ntBASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 AP002371.2-201ENST00000624450 503 ntBASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 MIR1910-201ENST00000636955 80 ntBASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 AC099654.2-201ENST00000433031 1980 ntBASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 HSPA8P17-201ENST00000427029 1382 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 ZNF733P-202ENST00000444809 1573 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AC027290.2-201ENST00000623210 18662 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 Y_RNA.110-201ENST00000363220 99 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 MIR513A2-201ENST00000385249 127 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AL589647.1-201ENST00000402485 466 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 UBTFL3-201ENST00000418934 1024 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 NPM1P26-201ENST00000426339 738 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AL390879.2-203ENST00000426943 1121 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AC079807.1-201ENST00000429993 481 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 CFL1P1-202ENST00000432948 411 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 RPL7P11-201ENST00000437586 658 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 RPL31P20-201ENST00000449593 360 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AC090142.1-201ENST00000465776 462 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 UBTFL6-201ENST00000477929 1024 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AC090013.1-201ENST00000485147 480 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 PARP4P3-201ENST00000510265 317 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AC108157.1-201ENST00000510511 539 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 SETP12-201ENST00000514068 805 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 RNU6-319P-201ENST00000516025 108 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 IGLVIV-53-201ENST00000520107 367 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AC074029.2-201ENST00000551045 634 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AC040174.2-201ENST00000602701 465 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AC011453.2-201ENST00000603737 729 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AC004477.3-201ENST00000614061 590 ntBASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC28BQ9BUN5 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 RNU4-39P-201ENST00000362455 127 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 RNU6-984P-201ENST00000363236 109 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 SNORA27.3-201ENST00000364937 134 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 RNA5SP151-201ENST00000365632 117 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 RNU6-178P-201ENST00000384631 104 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 U3.30-201ENST00000391308 210 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 RAB5CP1-201ENST00000395972 580 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 AP002530.1-201ENST00000405705 684 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 VN1R8P-201ENST00000407739 893 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 AC099535.1-201ENST00000408928 371 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 OR51B3P-201ENST00000412287 913 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 AL513325.1-201ENST00000417716 1034 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 ELOCP18-201ENST00000434209 337 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 RPL7P28-201ENST00000437739 740 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 RAB28P3-201ENST00000448325 597 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 AC022336.1-201ENST00000475510 337 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 AC146944.2-203ENST00000502493 354 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms