Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.65□□□□□ -1.19
TRIM47Q96LD4 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
TRIM47Q96LD4 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
TRIM47Q96LD4 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
TRIM47Q96LD4 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 LYARP1-201ENST00000436977 1501 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 AC119674.1-204ENST00000641348 1343 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 COX6B1P3-201ENST00000312310 260 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 RNU6-1085P-201ENST00000363576 107 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 RNU6-702P-201ENST00000364982 107 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 SNORA70.3-201ENST00000365075 132 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 RN7SKP81-201ENST00000365603 331 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 RNU6-43P-201ENST00000384302 107 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 RNU6-1026P-201ENST00000384465 108 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 MIR541-201ENST00000401360 84 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 RN7SKP140-201ENST00000411196 284 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 PIGPP2-201ENST00000411569 458 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 AC017035.1-201ENST00000411999 1115 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 CHEK2P5-201ENST00000423877 246 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 RPL23AP35-201ENST00000451906 501 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 AP000797.1-201ENST00000478870 387 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 HMGB1P29-201ENST00000505659 499 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 AC107222.1-201ENST00000510899 637 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 AC011352.2-201ENST00000514574 1016 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 PAICSP4-201ENST00000517543 1253 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 TRIM77BP-201ENST00000524985 1119 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 AC004805.3-201ENST00000603178 310 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 AC093635.1-201ENST00000609028 555 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 AC234782.5-201ENST00000617723 324 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 AC091905.1-201ENST00000624400 311 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 ABCA11P-202ENST00000504019 2110 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.64□□□□□ -1.19
TRIM47Q96LD4 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
TRIM47Q96LD4 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
TRIM47Q96LD4 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
TRIM47Q96LD4 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
TRIM47Q96LD4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
TRIM47Q96LD4 CNOT6LP1-201ENST00000559681 1462 ntBASIC7.63□□□□□ -1.19
TRIM47Q96LD4 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.63□□□□□ -1.19
TRIM47Q96LD4 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
TRIM47Q96LD4 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TRIM47Q96LD4 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TRIM47Q96LD4 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.63□□□□□ -1.19
TRIM47Q96LD4 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
TRIM47Q96LD4 SNORA63.7-201ENST00000365579 123 ntBASIC7.63□□□□□ -1.19
TRIM47Q96LD4 Y_RNA.384-201ENST00000383909 102 ntBASIC7.63□□□□□ -1.19
TRIM47Q96LD4 AC093719.1-202ENST00000392735 373 ntBASIC7.63□□□□□ -1.19
TRIM47Q96LD4 DNAJC19P6-201ENST00000401853 280 ntBASIC7.63□□□□□ -1.19
TRIM47Q96LD4 MTCO2P33-201ENST00000402100 465 ntBASIC7.63□□□□□ -1.19
TRIM47Q96LD4 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
TRIM47Q96LD4 SNRPEP10-201ENST00000420249 274 ntBASIC7.63□□□□□ -1.19
TRIM47Q96LD4 AC092647.1-201ENST00000420654 287 ntBASIC7.63□□□□□ -1.19
TRIM47Q96LD4 RPL7AP14-201ENST00000424041 802 ntBASIC7.63□□□□□ -1.19
TRIM47Q96LD4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
TRIM47Q96LD4 EMC3-AS1-205ENST00000438698 534 ntBASIC7.63□□□□□ -1.19
TRIM47Q96LD4 AC073109.1-201ENST00000445066 978 ntBASIC7.63□□□□□ -1.19
TRIM47Q96LD4 SNORD19B-201ENST00000459623 84 ntBASIC7.63□□□□□ -1.19
TRIM47Q96LD4 GM2AP2-201ENST00000491764 562 ntBASIC7.63□□□□□ -1.19
TRIM47Q96LD4 RN7SL104P-201ENST00000498686 293 ntBASIC7.63□□□□□ -1.19
TRIM47Q96LD4 AC103851.1-201ENST00000506833 274 ntBASIC7.63□□□□□ -1.19
TRIM47Q96LD4 RNU6-1281P-201ENST00000516223 105 ntBASIC7.63□□□□□ -1.19
TRIM47Q96LD4 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC7.63□□□□□ -1.19
TRIM47Q96LD4 AP003122.3-201ENST00000526316 255 ntBASIC7.63□□□□□ -1.19
TRIM47Q96LD4 AP002748.2-201ENST00000528671 348 ntBASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms