Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
VMP1Q96GC9 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.93□□□□□ -1.62
VMP1Q96GC9 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.93□□□□□ -1.62
VMP1Q96GC9 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.93□□□□□ -1.62
VMP1Q96GC9 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.93□□□□□ -1.62
VMP1Q96GC9 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VMP1Q96GC9 AL731537.2-201ENST00000561565 951 ntBASIC4.93□□□□□ -1.62
VMP1Q96GC9 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.93□□□□□ -1.62
VMP1Q96GC9 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.93□□□□□ -1.62
VMP1Q96GC9 AC067852.4-201ENST00000590314 478 ntBASIC4.93□□□□□ -1.62
VMP1Q96GC9 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.93□□□□□ -1.62
VMP1Q96GC9 AL353600.1-201ENST00000608148 251 ntBASIC4.93□□□□□ -1.62
VMP1Q96GC9 AC015914.2-201ENST00000618167 288 ntBASIC4.93□□□□□ -1.62
VMP1Q96GC9 ATE1-AS1-202ENST00000636460 506 ntBASIC4.93□□□□□ -1.62
VMP1Q96GC9 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VMP1Q96GC9 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.93□□□□□ -1.62
VMP1Q96GC9 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.93□□□□□ -1.62
VMP1Q96GC9 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VMP1Q96GC9 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 HSPA8P19-201ENST00000505359 1517 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 C4BPAP1-201ENST00000415474 1893 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
VMP1Q96GC9 AC022031.1-201ENST00000585985 2593 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VMP1Q96GC9 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 AL049737.1-201ENST00000413920 1403 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
VMP1Q96GC9 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 RN7SKP153-201ENST00000365026 316 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 RNU1-43P-201ENST00000365052 165 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
VMP1Q96GC9 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 AC004022.2-201ENST00000413824 193 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 TATDN1P1-201ENST00000414123 891 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 AC069540.1-201ENST00000446320 988 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 RN7SL222P-201ENST00000476452 299 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 OR5H4P-201ENST00000510851 923 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 GTF2F2P1-201ENST00000511083 675 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 RNA5SP373-201ENST00000517271 95 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 AC022832.1-201ENST00000530718 645 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 AC090751.1-201ENST00000566966 267 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VMP1Q96GC9 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 AC095055.1-201ENST00000603472 1113 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 OR4H6P-202ENST00000603819 340 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 AC069304.3-201ENST00000603938 1084 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 AC013244.1-201ENST00000604279 193 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VMP1Q96GC9 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 AL450345.1-202ENST00000605741 3881 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
VMP1Q96GC9 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VMP1Q96GC9 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VMP1Q96GC9 AC092747.4-201ENST00000620519 1861 ntBASIC4.92□□□□□ -1.62
VMP1Q96GC9 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
VMP1Q96GC9 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VMP1Q96GC9 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VMP1Q96GC9 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VMP1Q96GC9 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VMP1Q96GC9 SNORA17.1-201ENST00000362945 126 ntBASIC4.91□□□□□ -1.62
VMP1Q96GC9 RN7SKP44-201ENST00000363602 316 ntBASIC4.91□□□□□ -1.62
VMP1Q96GC9 AC013442.1-201ENST00000397347 228 ntBASIC4.91□□□□□ -1.62
VMP1Q96GC9 DUTP5-201ENST00000406790 469 ntBASIC4.91□□□□□ -1.62
VMP1Q96GC9 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.91□□□□□ -1.62
VMP1Q96GC9 AC124944.2-201ENST00000429866 1242 ntBASIC4.91□□□□□ -1.62
VMP1Q96GC9 RPS6P12-201ENST00000432491 726 ntBASIC4.91□□□□□ -1.62
VMP1Q96GC9 AC105402.2-201ENST00000438503 358 ntBASIC4.91□□□□□ -1.62
VMP1Q96GC9 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 AL389915.2-201ENST00000454576 441 ntBASIC4.91□□□□□ -1.62
VMP1Q96GC9 HMGB1P21-201ENST00000502313 581 ntBASIC4.91□□□□□ -1.62
VMP1Q96GC9 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms