Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE4Q8N205 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE4Q8N205 AC096533.1-201ENST00000411645 353 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 KRR1P1-201ENST00000419430 803 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 BX276092.6-201ENST00000430476 250 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE4Q8N205 NRBF2P3-201ENST00000432731 865 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 ARL5AP3-201ENST00000439327 386 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 AL513321.1-201ENST00000441175 761 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 Z99127.2-201ENST00000441426 334 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 AC000111.2-201ENST00000448200 210 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 RPL31P20-201ENST00000449593 360 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 BX276092.8-201ENST00000455722 250 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC6.16□□□□□ -1.42
SYNE4Q8N205 RPSAP51-201ENST00000497462 645 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.16□□□□□ -1.42
SYNE4Q8N205 AC010486.3-201ENST00000511602 785 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 OR4V1P-201ENST00000525394 1140 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 AL356057.1-201ENST00000533798 831 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.16□□□□□ -1.42
SYNE4Q8N205 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE4Q8N205 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC6.16□□□□□ -1.42
SYNE4Q8N205 PIGPP4-201ENST00000584447 307 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.16□□□□□ -1.42
SYNE4Q8N205 AC113368.1-201ENST00000603736 382 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE4Q8N205 AC009090.3-201ENST00000616553 565 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 AL512427.1-201ENST00000618593 349 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 MIR6853-201ENST00000619642 74 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 AC021422.1-201ENST00000621212 473 ntBASIC6.16□□□□□ -1.42
SYNE4Q8N205 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.16□□□□□ -1.42
SYNE4Q8N205 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE4Q8N205 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SYNE4Q8N205 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE4Q8N205 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
SYNE4Q8N205 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE4Q8N205 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE4Q8N205 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE4Q8N205 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE4Q8N205 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 KARSP3-201ENST00000571212 1504 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SYNE4Q8N205 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SYNE4Q8N205 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SYNE4Q8N205 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
SYNE4Q8N205 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SYNE4Q8N205 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 AL590240.1-201ENST00000334118 313 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 MIR365B-201ENST00000362317 111 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 RNA5SP453-201ENST00000362503 119 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 SNORD115-48-201ENST00000364764 76 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SYNE4Q8N205 SNORD116-8-201ENST00000384365 95 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 U3.30-201ENST00000391308 210 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 SKINT1L-201ENST00000401057 817 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 AL645608.4-201ENST00000423619 154 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 CHIAP3-201ENST00000423668 1133 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 RPS6P15-201ENST00000431996 751 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 AC096638.2-201ENST00000434965 711 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 CABYRP1-201ENST00000465493 1045 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 AC022336.1-201ENST00000475510 337 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 AC135999.1-201ENST00000478962 479 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 FABP5P6-201ENST00000510588 409 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 AC125611.1-201ENST00000549563 229 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 AGGF1P9-201ENST00000561884 913 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 AP005136.1-201ENST00000579765 429 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 RN7SL690P-201ENST00000582087 240 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 MIR4715-201ENST00000584117 79 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 BNIP3P33-201ENST00000598912 569 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 AC010620.1-201ENST00000601088 1102 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 AC002487.1-201ENST00000604565 994 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 AC079416.3-201ENST00000624479 549 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC6.15□□□□□ -1.42
SYNE4Q8N205 OR52H1-202ENST00000641796 1061 ntBASIC6.15□□□□□ -1.42
SYNE4Q8N205 OR5AC4P-202ENST00000642086 985 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 220.8 ms