Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 FAM172BP-201ENST00000487497 1089 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AC114981.1-201ENST00000503897 678 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 RPS27AP18-201ENST00000515536 459 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 OSBPL9P2-201ENST00000526582 1228 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AC090502.2-201ENST00000549267 280 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 NTS-203ENST00000551529 801 ntTSL 3 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 MTND1P15-201ENST00000579262 949 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 MIR6768-201ENST00000610734 72 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AL445647.2-201ENST00000615170 130 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 DLEU1_2.1-201ENST00000617920 342 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 MIR8089-201ENST00000620165 82 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AC005332.9-201ENST00000620266 2921 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 XPOTP1-201ENST00000443317 2398 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 AC105114.1-201ENST00000624795 1862 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 AC103591.2-201ENST00000265259 766 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 OR52B3P-201ENST00000314715 928 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 MIR323A-201ENST00000362199 86 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 RNU6-797P-201ENST00000363101 109 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 U3.43-201ENST00000410734 213 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 RN7SKP33-201ENST00000410942 340 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 RPL35AP31-201ENST00000418340 337 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 AC009237.2-201ENST00000421358 284 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 AL161636.2-201ENST00000445179 927 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 AP000542.1-201ENST00000448473 371 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 RN7SL273P-201ENST00000481561 299 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 RPL7P24-201ENST00000493052 752 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 ST13P12-201ENST00000508958 1094 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 GTF2F2P1-201ENST00000511083 675 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 RN7SKP298-201ENST00000515950 94 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 ADI1P3-201ENST00000549509 470 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 SULT1C2P1-202ENST00000562418 459 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 AC009120.3-201ENST00000563335 499 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 AP005119.1-201ENST00000580956 292 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 ELOCP28-201ENST00000590044 317 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 BNIP3P11-201ENST00000603878 563 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 AC115286.1-201ENST00000604298 434 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 AC112187.2-201ENST00000604345 283 ntBASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NPAS4Q8IUM7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms