Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC3.92□□□□□ -1.78
USF2Q15853 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USF2Q15853 NDUFB4P11-201ENST00000560510 395 ntBASIC3.92□□□□□ -1.78
USF2Q15853 AP000919.1-201ENST00000582850 985 ntBASIC3.92□□□□□ -1.78
USF2Q15853 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.92□□□□□ -1.78
USF2Q15853 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.92□□□□□ -1.78
USF2Q15853 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.92□□□□□ -1.78
USF2Q15853 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.92□□□□□ -1.78
USF2Q15853 AL049634.3-201ENST00000604968 457 ntBASIC3.92□□□□□ -1.78
USF2Q15853 AC079395.2-201ENST00000610982 737 ntBASIC3.92□□□□□ -1.78
USF2Q15853 RPSAP73-201ENST00000614820 330 ntBASIC3.92□□□□□ -1.78
USF2Q15853 MIR6826-201ENST00000617808 98 ntBASIC3.92□□□□□ -1.78
USF2Q15853 AL590410.1-201ENST00000617925 333 ntBASIC3.92□□□□□ -1.78
USF2Q15853 AL645927.2-201ENST00000618350 349 ntBASIC3.92□□□□□ -1.78
USF2Q15853 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.92□□□□□ -1.78
USF2Q15853 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.92□□□□□ -1.78
USF2Q15853 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.92□□□□□ -1.78
USF2Q15853 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC3.92□□□□□ -1.78
USF2Q15853 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USF2Q15853 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
USF2Q15853 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.92□□□□□ -1.78
USF2Q15853 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
USF2Q15853 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.91□□□□□ -1.78
USF2Q15853 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
USF2Q15853 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USF2Q15853 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
USF2Q15853 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USF2Q15853 AC007685.1-201ENST00000329806 452 ntBASIC3.91□□□□□ -1.78
USF2Q15853 RNA5SP183-201ENST00000362452 119 ntBASIC3.91□□□□□ -1.78
USF2Q15853 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.91□□□□□ -1.78
USF2Q15853 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.91□□□□□ -1.78
USF2Q15853 RPL35AP24-201ENST00000413846 330 ntBASIC3.91□□□□□ -1.78
USF2Q15853 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC3.91□□□□□ -1.78
USF2Q15853 CYP4F29P-201ENST00000420685 446 ntBASIC3.91□□□□□ -1.78
USF2Q15853 FABP7P1-201ENST00000424004 391 ntBASIC3.91□□□□□ -1.78
USF2Q15853 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC3.91□□□□□ -1.78
USF2Q15853 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC3.91□□□□□ -1.78
USF2Q15853 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC3.91□□□□□ -1.78
USF2Q15853 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.91□□□□□ -1.78
USF2Q15853 AC006967.1-201ENST00000467608 589 ntBASIC3.91□□□□□ -1.78
USF2Q15853 RN7SL441P-201ENST00000492388 296 ntBASIC3.91□□□□□ -1.78
USF2Q15853 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.91□□□□□ -1.78
USF2Q15853 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.91□□□□□ -1.78
USF2Q15853 OR5H4P-201ENST00000510851 923 ntBASIC3.91□□□□□ -1.78
USF2Q15853 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
USF2Q15853 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC3.91□□□□□ -1.78
USF2Q15853 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.91□□□□□ -1.78
USF2Q15853 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
USF2Q15853 PYM1-205ENST00000547925 499 ntTSL 3 BASIC3.91□□□□□ -1.78
USF2Q15853 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USF2Q15853 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.91□□□□□ -1.78
USF2Q15853 AL512310.9-201ENST00000553311 948 ntBASIC3.91□□□□□ -1.78
USF2Q15853 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.91□□□□□ -1.78
USF2Q15853 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC3.91□□□□□ -1.78
USF2Q15853 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
USF2Q15853 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.91□□□□□ -1.78
USF2Q15853 AC055764.2-201ENST00000610089 670 ntBASIC3.91□□□□□ -1.78
USF2Q15853 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.91□□□□□ -1.78
USF2Q15853 WWOX-217ENST00000620008 450 ntTSL 2 BASIC3.91□□□□□ -1.78
USF2Q15853 AC015726.3-201ENST00000624501 418 ntBASIC3.91□□□□□ -1.78
USF2Q15853 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC3.91□□□□□ -1.78
USF2Q15853 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.91□□□□□ -1.78
USF2Q15853 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC3.91□□□□□ -1.78
USF2Q15853 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
USF2Q15853 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USF2Q15853 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
USF2Q15853 AC011493.1-201ENST00000596753 1632 ntBASIC3.91□□□□□ -1.78
USF2Q15853 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
USF2Q15853 AC095050.2-201ENST00000510748 1458 ntBASIC3.91□□□□□ -1.78
USF2Q15853 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
USF2Q15853 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
USF2Q15853 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC3.91□□□□□ -1.78
USF2Q15853 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
USF2Q15853 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
USF2Q15853 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
USF2Q15853 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
USF2Q15853 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
USF2Q15853 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
USF2Q15853 U3.2-201ENST00000362981 210 ntBASIC3.9□□□□□ -1.79
USF2Q15853 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.9□□□□□ -1.79
USF2Q15853 MIR195-201ENST00000385194 87 ntBASIC3.9□□□□□ -1.79
USF2Q15853 U3.25-201ENST00000391209 220 ntBASIC3.9□□□□□ -1.79
USF2Q15853 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
USF2Q15853 AP000580.1-201ENST00000404439 358 ntBASIC3.9□□□□□ -1.79
USF2Q15853 AMZ2P2-201ENST00000406819 1057 ntBASIC3.9□□□□□ -1.79
USF2Q15853 NPM1P26-201ENST00000426339 738 ntBASIC3.9□□□□□ -1.79
USF2Q15853 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.9□□□□□ -1.79
USF2Q15853 BX323845.1-201ENST00000432417 179 ntBASIC3.9□□□□□ -1.79
USF2Q15853 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.9□□□□□ -1.79
USF2Q15853 TXNP5-201ENST00000441043 315 ntBASIC3.9□□□□□ -1.79
USF2Q15853 SPRYD7P1-201ENST00000443861 570 ntBASIC3.9□□□□□ -1.79
USF2Q15853 Z80107.2-201ENST00000445127 392 ntBASIC3.9□□□□□ -1.79
USF2Q15853 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.9□□□□□ -1.79
USF2Q15853 SNORD108-201ENST00000459332 71 ntBASIC3.9□□□□□ -1.79
USF2Q15853 AC009127.1-201ENST00000467090 155 ntBASIC3.9□□□□□ -1.79
USF2Q15853 RN7SL41P-201ENST00000476144 297 ntBASIC3.9□□□□□ -1.79
USF2Q15853 RN7SL817P-201ENST00000480777 288 ntBASIC3.9□□□□□ -1.79
USF2Q15853 AC108693.1-201ENST00000496068 432 ntBASIC3.9□□□□□ -1.79
USF2Q15853 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
USF2Q15853 PGAM1P13-201ENST00000507497 754 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms