Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AP003392.5-201ENST00000607857 415 ntBASIC5.02□□□□□ -1.61
RAE1P78406 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.02□□□□□ -1.61
RAE1P78406 MIR6861-201ENST00000618657 64 ntBASIC5.02□□□□□ -1.61
RAE1P78406 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.02□□□□□ -1.61
RAE1P78406 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.02□□□□□ -1.61
RAE1P78406 MIR3974-201ENST00000637126 96 ntBASIC5.02□□□□□ -1.61
RAE1P78406 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RAE1P78406 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RAE1P78406 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RAE1P78406 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.02□□□□□ -1.61
RAE1P78406 AC006210.2-201ENST00000367074 1545 ntBASIC5.02□□□□□ -1.61
RAE1P78406 AP000473.2-201ENST00000602659 1537 ntBASIC5.02□□□□□ -1.61
RAE1P78406 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.02□□□□□ -1.61
RAE1P78406 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RAE1P78406 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
RAE1P78406 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RAE1P78406 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RAE1P78406 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RAE1P78406 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.01□□□□□ -1.61
RAE1P78406 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.01□□□□□ -1.61
RAE1P78406 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RAE1P78406 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
RAE1P78406 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RAE1P78406 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.01□□□□□ -1.61
RAE1P78406 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RAE1P78406 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RAE1P78406 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RAE1P78406 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.01□□□□□ -1.61
RAE1P78406 AL356131.1-201ENST00000405826 414 ntBASIC5.01□□□□□ -1.61
RAE1P78406 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.01□□□□□ -1.61
RAE1P78406 RN7SKP293-201ENST00000411389 296 ntBASIC5.01□□□□□ -1.61
RAE1P78406 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.01□□□□□ -1.61
RAE1P78406 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.01□□□□□ -1.61
RAE1P78406 AC009518.2-201ENST00000418056 731 ntBASIC5.01□□□□□ -1.61
RAE1P78406 DPPA2P2-201ENST00000418220 897 ntBASIC5.01□□□□□ -1.61
RAE1P78406 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.01□□□□□ -1.61
RAE1P78406 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.01□□□□□ -1.61
RAE1P78406 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.01□□□□□ -1.61
RAE1P78406 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.01□□□□□ -1.61
RAE1P78406 AC079807.1-201ENST00000429993 481 ntBASIC5.01□□□□□ -1.61
RAE1P78406 AC022022.1-201ENST00000430304 178 ntBASIC5.01□□□□□ -1.61
RAE1P78406 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.01□□□□□ -1.61
RAE1P78406 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.01□□□□□ -1.61
RAE1P78406 RPS26P30-201ENST00000443431 335 ntBASIC5.01□□□□□ -1.61
RAE1P78406 REG1CP-206ENST00000447469 496 ntBASIC5.01□□□□□ -1.61
RAE1P78406 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.01□□□□□ -1.61
RAE1P78406 AURKAPS1-201ENST00000451805 1212 ntBASIC5.01□□□□□ -1.61
RAE1P78406 AC234781.3-201ENST00000452540 973 ntBASIC5.01□□□□□ -1.61
RAE1P78406 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.01□□□□□ -1.61
RAE1P78406 AC023141.9-201ENST00000458734 412 ntBASIC5.01□□□□□ -1.61
RAE1P78406 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.01□□□□□ -1.61
RAE1P78406 AC006427.1-201ENST00000514359 712 ntBASIC5.01□□□□□ -1.61
RAE1P78406 RNU6-941P-201ENST00000516346 108 ntBASIC5.01□□□□□ -1.61
RAE1P78406 IGKV2D-10-201ENST00000520194 281 ntBASIC5.01□□□□□ -1.61
RAE1P78406 AC100784.1-201ENST00000522790 310 ntBASIC5.01□□□□□ -1.61
RAE1P78406 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.01□□□□□ -1.61
RAE1P78406 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.01□□□□□ -1.61
RAE1P78406 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.01□□□□□ -1.61
RAE1P78406 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.01□□□□□ -1.61
RAE1P78406 GCSHP4-201ENST00000538792 439 ntBASIC5.01□□□□□ -1.61
RAE1P78406 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.01□□□□□ -1.61
RAE1P78406 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.01□□□□□ -1.61
RAE1P78406 POLR2KP1-201ENST00000553226 168 ntBASIC5.01□□□□□ -1.61
RAE1P78406 AL442163.2-201ENST00000553912 710 ntBASIC5.01□□□□□ -1.61
RAE1P78406 AC109446.2-201ENST00000567872 497 ntBASIC5.01□□□□□ -1.61
RAE1P78406 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.01□□□□□ -1.61
RAE1P78406 SNORD95-201ENST00000579879 68 ntBASIC5.01□□□□□ -1.61
RAE1P78406 RN7SL708P-201ENST00000580952 299 ntBASIC5.01□□□□□ -1.61
RAE1P78406 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.01□□□□□ -1.61
RAE1P78406 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.01□□□□□ -1.61
RAE1P78406 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.01□□□□□ -1.61
RAE1P78406 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.01□□□□□ -1.61
RAE1P78406 AC068790.7-201ENST00000602347 528 ntBASIC5.01□□□□□ -1.61
RAE1P78406 AP000238.1-201ENST00000608759 426 ntBASIC5.01□□□□□ -1.61
RAE1P78406 AC099676.1-201ENST00000608886 657 ntBASIC5.01□□□□□ -1.61
RAE1P78406 AL592148.2-201ENST00000612210 372 ntBASIC5.01□□□□□ -1.61
RAE1P78406 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RAE1P78406 AC007204.2-201ENST00000615022 616 ntBASIC5.01□□□□□ -1.61
RAE1P78406 AP001962.1-201ENST00000624114 559 ntBASIC5.01□□□□□ -1.61
RAE1P78406 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.01□□□□□ -1.61
RAE1P78406 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RAE1P78406 BX005019.1-201ENST00000561881 1810 ntBASIC5.01□□□□□ -1.61
RAE1P78406 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RAE1P78406 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RAE1P78406 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RAE1P78406 TRIM51GP-201ENST00000534741 1350 ntBASIC5.01□□□□□ -1.61
RAE1P78406 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.01□□□□□ -1.61
RAE1P78406 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5□□□□□ -1.61
RAE1P78406 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
RAE1P78406 OR55B1P-203ENST00000641518 2602 ntBASIC5□□□□□ -1.61
RAE1P78406 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
RAE1P78406 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5□□□□□ -1.61
RAE1P78406 AC083837.1-201ENST00000565297 2994 ntBASIC5□□□□□ -1.61
RAE1P78406 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RAE1P78406 AP005432.1-201ENST00000580891 3485 ntBASIC5□□□□□ -1.61
RAE1P78406 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RAE1P78406 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RAE1P78406 snoZ40.1-201ENST00000364540 72 ntBASIC5□□□□□ -1.61
RAE1P78406 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RAE1P78406 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms