Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ACTBP60709 RPL21P43-201ENST00000425440 472 ntBASIC4.01□□□□□ -1.77
ACTBP60709 CENPIP1-201ENST00000425713 902 ntBASIC4.01□□□□□ -1.77
ACTBP60709 AC073069.1-201ENST00000428657 441 ntBASIC4.01□□□□□ -1.77
ACTBP60709 RPL21P91-201ENST00000429231 479 ntBASIC4.01□□□□□ -1.77
ACTBP60709 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.01□□□□□ -1.77
ACTBP60709 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ACTBP60709 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.01□□□□□ -1.77
ACTBP60709 RPL23AP25-201ENST00000430973 463 ntBASIC4.01□□□□□ -1.77
ACTBP60709 EEF1B2P5-201ENST00000444820 548 ntBASIC4.01□□□□□ -1.77
ACTBP60709 AC005532.2-201ENST00000467154 373 ntBASIC4.01□□□□□ -1.77
ACTBP60709 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.01□□□□□ -1.77
ACTBP60709 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.01□□□□□ -1.77
ACTBP60709 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.01□□□□□ -1.77
ACTBP60709 UBTFL6-201ENST00000477929 1024 ntBASIC4.01□□□□□ -1.77
ACTBP60709 AC109462.1-201ENST00000491087 368 ntBASIC4.01□□□□□ -1.77
ACTBP60709 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ACTBP60709 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.01□□□□□ -1.77
ACTBP60709 AK4P6-201ENST00000505168 528 ntBASIC4.01□□□□□ -1.77
ACTBP60709 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.01□□□□□ -1.77
ACTBP60709 AC004980.4-201ENST00000513375 203 ntBASIC4.01□□□□□ -1.77
ACTBP60709 RNA5SP43-201ENST00000516559 110 ntBASIC4.01□□□□□ -1.77
ACTBP60709 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.01□□□□□ -1.77
ACTBP60709 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
ACTBP60709 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.01□□□□□ -1.77
ACTBP60709 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.01□□□□□ -1.77
ACTBP60709 AL049844.2-201ENST00000604280 628 ntBASIC4.01□□□□□ -1.77
ACTBP60709 AC010200.2-201ENST00000605098 235 ntBASIC4.01□□□□□ -1.77
ACTBP60709 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.01□□□□□ -1.77
ACTBP60709 AC093799.2-201ENST00000610062 578 ntBASIC4.01□□□□□ -1.77
ACTBP60709 SDR42E1P1-201ENST00000611327 477 ntBASIC4.01□□□□□ -1.77
ACTBP60709 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ACTBP60709 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.01□□□□□ -1.77
ACTBP60709 LINC01739-205ENST00000641890 573 ntBASIC4.01□□□□□ -1.77
ACTBP60709 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ACTBP60709 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ACTBP60709 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ACTBP60709 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
ACTBP60709 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ACTBP60709 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4□□□□□ -1.77
ACTBP60709 CR788268.1-201ENST00000603931 1809 ntBASIC4□□□□□ -1.77
ACTBP60709 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ACTBP60709 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4□□□□□ -1.77
ACTBP60709 RNA5SP428-201ENST00000365129 132 ntBASIC4□□□□□ -1.77
ACTBP60709 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
ACTBP60709 RNU1-106P-201ENST00000384382 164 ntBASIC4□□□□□ -1.77
ACTBP60709 AL589647.1-201ENST00000402485 466 ntBASIC4□□□□□ -1.77
ACTBP60709 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
ACTBP60709 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4□□□□□ -1.77
ACTBP60709 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4□□□□□ -1.77
ACTBP60709 RNU4-34P-201ENST00000410431 124 ntBASIC4□□□□□ -1.77
ACTBP60709 RNA5SP104-201ENST00000410989 118 ntBASIC4□□□□□ -1.77
ACTBP60709 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4□□□□□ -1.77
ACTBP60709 GSTM3P2-201ENST00000412746 530 ntBASIC4□□□□□ -1.77
ACTBP60709 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4□□□□□ -1.77
ACTBP60709 RPL34P20-201ENST00000442771 351 ntBASIC4□□□□□ -1.77
ACTBP60709 AL137845.2-201ENST00000444292 988 ntBASIC4□□□□□ -1.77
ACTBP60709 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4□□□□□ -1.77
ACTBP60709 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4□□□□□ -1.77
ACTBP60709 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4□□□□□ -1.77
ACTBP60709 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4□□□□□ -1.77
ACTBP60709 AC008897.1-201ENST00000494006 347 ntBASIC4□□□□□ -1.77
ACTBP60709 AC008953.1-201ENST00000497334 318 ntBASIC4□□□□□ -1.77
ACTBP60709 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4□□□□□ -1.77
ACTBP60709 RNA5SP446-201ENST00000515955 82 ntBASIC4□□□□□ -1.77
ACTBP60709 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4□□□□□ -1.77
ACTBP60709 AC069240.1-201ENST00000548774 375 ntBASIC4□□□□□ -1.77
ACTBP60709 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4□□□□□ -1.77
ACTBP60709 AC007448.1-201ENST00000582714 234 ntBASIC4□□□□□ -1.77
ACTBP60709 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4□□□□□ -1.77
ACTBP60709 AC007423.1-201ENST00000605009 627 ntBASIC4□□□□□ -1.77
ACTBP60709 AC015813.4-201ENST00000610469 179 ntBASIC4□□□□□ -1.77
ACTBP60709 EIF3FP1-201ENST00000613970 806 ntBASIC4□□□□□ -1.77
ACTBP60709 AL591926.8-201ENST00000616876 211 ntBASIC4□□□□□ -1.77
ACTBP60709 AC009318.3-201ENST00000616916 503 ntBASIC4□□□□□ -1.77
ACTBP60709 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4□□□□□ -1.77
ACTBP60709 AL356121.2-201ENST00000624715 780 ntBASIC4□□□□□ -1.77
ACTBP60709 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ACTBP60709 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4□□□□□ -1.77
ACTBP60709 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4□□□□□ -1.77
ACTBP60709 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
ACTBP60709 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
ACTBP60709 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
ACTBP60709 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
ACTBP60709 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4□□□□□ -1.77
ACTBP60709 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
ACTBP60709 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ACTBP60709 AC095050.2-201ENST00000510748 1458 ntBASIC3.99□□□□□ -1.77
ACTBP60709 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.99□□□□□ -1.77
ACTBP60709 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ACTBP60709 AL031119.1-201ENST00000404707 1879 ntBASIC3.99□□□□□ -1.77
ACTBP60709 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ACTBP60709 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
ACTBP60709 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ACTBP60709 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ACTBP60709 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
ACTBP60709 RNU6-304P-201ENST00000364855 107 ntBASIC3.99□□□□□ -1.77
ACTBP60709 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ACTBP60709 MIR3074-201ENST00000384885 81 ntBASIC3.99□□□□□ -1.77
ACTBP60709 MIR765-201ENST00000390226 114 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms