Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ZNF849P-201ENST00000594711 1566 ntBASIC6.03□□□□□ -1.44
RHBDL3P58872 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.03□□□□□ -1.44
RHBDL3P58872 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.03□□□□□ -1.44
RHBDL3P58872 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDL3P58872 RN7SKP113-201ENST00000363891 295 ntBASIC6.03□□□□□ -1.44
RHBDL3P58872 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
RHBDL3P58872 AC234772.1-201ENST00000377927 937 ntBASIC6.03□□□□□ -1.44
RHBDL3P58872 MIR525-201ENST00000384978 85 ntBASIC6.03□□□□□ -1.44
RHBDL3P58872 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDL3P58872 AF186996.5-201ENST00000418098 904 ntBASIC6.03□□□□□ -1.44
RHBDL3P58872 OR6C64P-201ENST00000419708 825 ntBASIC6.03□□□□□ -1.44
RHBDL3P58872 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.03□□□□□ -1.44
RHBDL3P58872 AC115285.1-201ENST00000424879 736 ntBASIC6.03□□□□□ -1.44
RHBDL3P58872 AC013262.1-201ENST00000426710 252 ntBASIC6.03□□□□□ -1.44
RHBDL3P58872 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.03□□□□□ -1.44
RHBDL3P58872 RPL12P28-201ENST00000430852 489 ntBASIC6.03□□□□□ -1.44
RHBDL3P58872 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.03□□□□□ -1.44
RHBDL3P58872 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
RHBDL3P58872 AL137845.2-201ENST00000444292 988 ntBASIC6.03□□□□□ -1.44
RHBDL3P58872 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.03□□□□□ -1.44
RHBDL3P58872 AC044797.1-201ENST00000445744 679 ntBASIC6.03□□□□□ -1.44
RHBDL3P58872 EEF1A1P1-201ENST00000447052 739 ntBASIC6.03□□□□□ -1.44
RHBDL3P58872 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.03□□□□□ -1.44
RHBDL3P58872 OR52J1P-201ENST00000450596 932 ntBASIC6.03□□□□□ -1.44
RHBDL3P58872 BX842559.2-201ENST00000451418 605 ntBASIC6.03□□□□□ -1.44
RHBDL3P58872 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.03□□□□□ -1.44
RHBDL3P58872 ABCC13-202ENST00000463099 3842 ntBASIC6.03□□□□□ -1.44
RHBDL3P58872 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.03□□□□□ -1.44
RHBDL3P58872 AL035404.1-201ENST00000497982 568 ntBASIC6.03□□□□□ -1.44
RHBDL3P58872 MTND3P3-201ENST00000505004 126 ntBASIC6.03□□□□□ -1.44
RHBDL3P58872 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDL3P58872 NAMPTP2-201ENST00000505629 1115 ntBASIC6.03□□□□□ -1.44
RHBDL3P58872 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.03□□□□□ -1.44
RHBDL3P58872 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.03□□□□□ -1.44
RHBDL3P58872 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.03□□□□□ -1.44
RHBDL3P58872 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.03□□□□□ -1.44
RHBDL3P58872 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.03□□□□□ -1.44
RHBDL3P58872 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.03□□□□□ -1.44
RHBDL3P58872 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.03□□□□□ -1.44
RHBDL3P58872 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.03□□□□□ -1.44
RHBDL3P58872 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.03□□□□□ -1.44
RHBDL3P58872 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.03□□□□□ -1.44
RHBDL3P58872 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.03□□□□□ -1.44
RHBDL3P58872 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.03□□□□□ -1.44
RHBDL3P58872 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.03□□□□□ -1.44
RHBDL3P58872 ATE1-AS1-202ENST00000636460 506 ntBASIC6.03□□□□□ -1.44
RHBDL3P58872 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.03□□□□□ -1.44
RHBDL3P58872 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.03□□□□□ -1.44
RHBDL3P58872 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDL3P58872 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDL3P58872 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
RHBDL3P58872 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.03□□□□□ -1.44
RHBDL3P58872 AL353743.4-201ENST00000422653 1547 ntBASIC6.03□□□□□ -1.44
RHBDL3P58872 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.03□□□□□ -1.44
RHBDL3P58872 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.03□□□□□ -1.44
RHBDL3P58872 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.03□□□□□ -1.44
RHBDL3P58872 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.44
RHBDL3P58872 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
RHBDL3P58872 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.02□□□□□ -1.45
RHBDL3P58872 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.02□□□□□ -1.45
RHBDL3P58872 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RHBDL3P58872 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RHBDL3P58872 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.02□□□□□ -1.45
RHBDL3P58872 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
RHBDL3P58872 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
RHBDL3P58872 SNORA51.12-201ENST00000384448 134 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 RPL31P52-201ENST00000407532 367 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 RN7SKP247-201ENST00000411094 308 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 AL358176.3-201ENST00000420757 454 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 CDY14P-201ENST00000431260 1014 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 AC093414.1-201ENST00000434712 514 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 PRPF38AP2-201ENST00000438179 851 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 AL450263.2-201ENST00000439400 589 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 RPS29P9-201ENST00000440360 171 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 CDY12P-201ENST00000440679 1015 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.02□□□□□ -1.45
RHBDL3P58872 RPL36AP15-201ENST00000444514 266 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 CDY13P-201ENST00000445813 1015 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 YWHAQP9-201ENST00000445891 512 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 CDY23P-201ENST00000451661 1014 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 AC010683.1-201ENST00000473673 378 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 RN7SL319P-201ENST00000480656 221 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.02□□□□□ -1.45
RHBDL3P58872 GAPDHP56-201ENST00000506031 988 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.02□□□□□ -1.45
RHBDL3P58872 AC092593.2-201ENST00000513866 913 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 MORF4L1P3-201ENST00000525966 950 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RHBDL3P58872 AC063949.1-201ENST00000552900 865 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.02□□□□□ -1.45
RHBDL3P58872 AC010735.1-201ENST00000567305 1026 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.02□□□□□ -1.45
RHBDL3P58872 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.02□□□□□ -1.45
RHBDL3P58872 AC068620.3-201ENST00000602749 560 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 AC011453.2-201ENST00000603737 729 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.02□□□□□ -1.45
RHBDL3P58872 AC017104.5-201ENST00000637647 639 ntBASIC6.02□□□□□ -1.45
RHBDL3P58872 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
RHBDL3P58872 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms