Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.32□□□□□ -1.72
LIM2P55344 FAM204CP-201ENST00000424489 642 ntBASIC4.32□□□□□ -1.72
LIM2P55344 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.32□□□□□ -1.72
LIM2P55344 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.32□□□□□ -1.72
LIM2P55344 MRPS33P4-201ENST00000434892 317 ntBASIC4.32□□□□□ -1.72
LIM2P55344 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.32□□□□□ -1.72
LIM2P55344 ARL4AP3-201ENST00000441452 574 ntBASIC4.32□□□□□ -1.72
LIM2P55344 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.32□□□□□ -1.72
LIM2P55344 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.32□□□□□ -1.72
LIM2P55344 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.32□□□□□ -1.72
LIM2P55344 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LIM2P55344 ARL4AP1-201ENST00000503220 705 ntBASIC4.32□□□□□ -1.72
LIM2P55344 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
LIM2P55344 RNA5SP446-201ENST00000515955 82 ntBASIC4.32□□□□□ -1.72
LIM2P55344 CYCSP28-201ENST00000534284 321 ntBASIC4.32□□□□□ -1.72
LIM2P55344 GSTP1P1-201ENST00000548078 319 ntBASIC4.32□□□□□ -1.72
LIM2P55344 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.32□□□□□ -1.72
LIM2P55344 AC012414.2-201ENST00000559474 187 ntBASIC4.32□□□□□ -1.72
LIM2P55344 AC092868.3-201ENST00000560515 784 ntBASIC4.32□□□□□ -1.72
LIM2P55344 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.32□□□□□ -1.72
LIM2P55344 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.32□□□□□ -1.72
LIM2P55344 BMS1P7-201ENST00000602440 1052 ntBASIC4.32□□□□□ -1.72
LIM2P55344 AC091979.2-201ENST00000607514 214 ntBASIC4.32□□□□□ -1.72
LIM2P55344 AL118556.2-201ENST00000614375 824 ntBASIC4.32□□□□□ -1.72
LIM2P55344 MIR7703-201ENST00000620784 77 ntBASIC4.32□□□□□ -1.72
LIM2P55344 AC020763.5-201ENST00000623298 430 ntBASIC4.32□□□□□ -1.72
LIM2P55344 AC019080.5-201ENST00000624891 757 ntBASIC4.32□□□□□ -1.72
LIM2P55344 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.32□□□□□ -1.72
LIM2P55344 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
LIM2P55344 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
LIM2P55344 DDX18P4-201ENST00000511690 1966 ntBASIC4.32□□□□□ -1.72
LIM2P55344 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
LIM2P55344 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LIM2P55344 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LIM2P55344 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LIM2P55344 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LIM2P55344 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LIM2P55344 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LIM2P55344 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LIM2P55344 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
LIM2P55344 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
LIM2P55344 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.31□□□□□ -1.72
LIM2P55344 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LIM2P55344 DHX40P1-201ENST00000588725 1412 ntBASIC4.31□□□□□ -1.72
LIM2P55344 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LIM2P55344 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
LIM2P55344 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.31□□□□□ -1.72
LIM2P55344 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LIM2P55344 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
LIM2P55344 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
LIM2P55344 SDHCP2-201ENST00000398565 501 ntBASIC4.31□□□□□ -1.72
LIM2P55344 EI24P3-201ENST00000399046 1062 ntBASIC4.31□□□□□ -1.72
LIM2P55344 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.31□□□□□ -1.72
LIM2P55344 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.31□□□□□ -1.72
LIM2P55344 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LIM2P55344 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LIM2P55344 AC004448.2-201ENST00000422360 586 ntBASIC4.31□□□□□ -1.72
LIM2P55344 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.31□□□□□ -1.72
LIM2P55344 SETP10-201ENST00000424368 814 ntBASIC4.31□□□□□ -1.72
LIM2P55344 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LIM2P55344 AC007563.3-201ENST00000433233 371 ntBASIC4.31□□□□□ -1.72
LIM2P55344 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.31□□□□□ -1.72
LIM2P55344 AC005008.1-201ENST00000456151 612 ntBASIC4.31□□□□□ -1.72
LIM2P55344 AC007686.1-201ENST00000488511 463 ntBASIC4.31□□□□□ -1.72
LIM2P55344 RPL23AP72-201ENST00000492447 435 ntBASIC4.31□□□□□ -1.72
LIM2P55344 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LIM2P55344 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.31□□□□□ -1.72
LIM2P55344 TCP11X3P-202ENST00000514289 1254 ntBASIC4.31□□□□□ -1.72
LIM2P55344 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.31□□□□□ -1.72
LIM2P55344 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.31□□□□□ -1.72
LIM2P55344 AP001781.1-201ENST00000530977 207 ntBASIC4.31□□□□□ -1.72
LIM2P55344 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LIM2P55344 AC137768.1-201ENST00000549998 553 ntBASIC4.31□□□□□ -1.72
LIM2P55344 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.31□□□□□ -1.72
LIM2P55344 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.31□□□□□ -1.72
LIM2P55344 ADAD1P2-201ENST00000588476 646 ntBASIC4.31□□□□□ -1.72
LIM2P55344 MIMT1-201ENST00000597105 1050 ntBASIC4.31□□□□□ -1.72
LIM2P55344 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.31□□□□□ -1.72
LIM2P55344 SNX6P1-201ENST00000601728 1224 ntBASIC4.31□□□□□ -1.72
LIM2P55344 MTCO2P22-201ENST00000603246 681 ntBASIC4.31□□□□□ -1.72
LIM2P55344 KATNBL1P1-201ENST00000605192 748 ntBASIC4.31□□□□□ -1.72
LIM2P55344 AC026979.4-201ENST00000606555 645 ntBASIC4.31□□□□□ -1.72
LIM2P55344 AL135786.2-201ENST00000608422 615 ntBASIC4.31□□□□□ -1.72
LIM2P55344 AC005021.1-201ENST00000608730 355 ntBASIC4.31□□□□□ -1.72
LIM2P55344 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.31□□□□□ -1.72
LIM2P55344 BX323046.1-201ENST00000610145 535 ntBASIC4.31□□□□□ -1.72
LIM2P55344 AC004241.3-201ENST00000611728 517 ntBASIC4.31□□□□□ -1.72
LIM2P55344 AC073342.3-201ENST00000624211 193 ntBASIC4.31□□□□□ -1.72
LIM2P55344 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.31□□□□□ -1.72
LIM2P55344 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.31□□□□□ -1.72
LIM2P55344 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
LIM2P55344 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.31□□□□□ -1.72
LIM2P55344 A2MP1-204ENST00000566278 4130 ntBASIC4.31□□□□□ -1.72
LIM2P55344 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
LIM2P55344 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LIM2P55344 MFSD8-216ENST00000641147 4009 ntBASIC4.31□□□□□ -1.72
LIM2P55344 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.31□□□□□ -1.72
LIM2P55344 CASC19-204ENST00000641001 2055 ntBASIC4.31□□□□□ -1.72
LIM2P55344 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LIM2P55344 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms